Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 Y_RNA.686-201ENST00000516548 134 ntBASIC-4.2□□□□□ -3.08
CCDC58Q4VC31 RNU6-813P-201ENST00000384691 107 ntBASIC-4.21□□□□□ -3.08
CCDC58Q4VC31 MIR630-201ENST00000384957 97 ntBASIC-4.21□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.590-201ENST00000410140 107 ntBASIC-4.21□□□□□ -3.08
CCDC58Q4VC31 RNA5SP106-201ENST00000517274 100 ntBASIC-4.21□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.11-201ENST00000362375 109 ntBASIC-4.22□□□□□ -3.08
CCDC58Q4VC31 SNORD114-13-201ENST00000364377 74 ntBASIC-4.22□□□□□ -3.08
CCDC58Q4VC31 RNU5E-3P-201ENST00000515913 68 ntBASIC-4.22□□□□□ -3.08
CCDC58Q4VC31 RNU6-361P-201ENST00000364454 107 ntBASIC-4.23□□□□□ -3.09
CCDC58Q4VC31 Y_RNA.554-201ENST00000384672 102 ntBASIC-4.23□□□□□ -3.09
CCDC58Q4VC31 MIR4694-201ENST00000578534 80 ntBASIC-4.23□□□□□ -3.09
CCDC58Q4VC31 MIR3613-201ENST00000579844 87 ntBASIC-4.23□□□□□ -3.09
CCDC58Q4VC31 MIR4282-201ENST00000583613 67 ntBASIC-4.23□□□□□ -3.09
CCDC58Q4VC31 AC113139.1-201ENST00000605049 239 ntBASIC-4.23□□□□□ -3.09
CCDC58Q4VC31 RNU6-800P-201ENST00000384473 103 ntBASIC-4.24□□□□□ -3.09
CCDC58Q4VC31 SNORA75.5-201ENST00000391291 81 ntBASIC-4.24□□□□□ -3.09
CCDC58Q4VC31 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-4.24□□□□□ -3.09
CCDC58Q4VC31 RNU6-1338P-201ENST00000516328 91 ntBASIC-4.24□□□□□ -3.09
CCDC58Q4VC31 AL359920.1-201ENST00000618332 176 ntBASIC-4.24□□□□□ -3.09
CCDC58Q4VC31 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-4.25□□□□□ -3.09
CCDC58Q4VC31 MTND4LP32-201ENST00000636111 270 ntBASIC-4.25□□□□□ -3.09
CCDC58Q4VC31 Y_RNA.166-201ENST00000363730 102 ntBASIC-4.26□□□□□ -3.09
CCDC58Q4VC31 RNU6-172P-201ENST00000411000 93 ntBASIC-4.26□□□□□ -3.09
CCDC58Q4VC31 RNU6-982P-201ENST00000516216 102 ntBASIC-4.26□□□□□ -3.09
CCDC58Q4VC31 Y_RNA.237-201ENST00000364439 102 ntBASIC-4.27□□□□□ -3.09
CCDC58Q4VC31 SNORD116-29-201ENST00000384516 83 ntBASIC-4.27□□□□□ -3.09
CCDC58Q4VC31 Y_RNA.652-201ENST00000458902 102 ntBASIC-4.28□□□□□ -3.09
CCDC58Q4VC31 SNORA40.15-201ENST00000516884 107 ntBASIC-4.28□□□□□ -3.09
CCDC58Q4VC31 MIR3688-2-201ENST00000636963 87 ntBASIC-4.28□□□□□ -3.09
CCDC58Q4VC31 RNU4-11P-201ENST00000365287 132 ntBASIC-4.29□□□□□ -3.1
CCDC58Q4VC31 RNY4P10-201ENST00000365571 96 ntBASIC-4.29□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.95-201ENST00000363079 95 ntBASIC-4.3□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.281-201ENST00000364774 94 ntBASIC-4.3□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.3□□□□□ -3.1
CCDC58Q4VC31 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-4.3□□□□□ -3.1
CCDC58Q4VC31 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.31□□□□□ -3.1
CCDC58Q4VC31 RNU6-275P-201ENST00000364910 107 ntBASIC-4.31□□□□□ -3.1
CCDC58Q4VC31 RNU6-1318P-201ENST00000365389 103 ntBASIC-4.31□□□□□ -3.1
CCDC58Q4VC31 RNY4P18-201ENST00000391107 89 ntBASIC-4.31□□□□□ -3.1
CCDC58Q4VC31 RNY3P15-201ENST00000516297 97 ntBASIC-4.31□□□□□ -3.1
CCDC58Q4VC31 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.31□□□□□ -3.1
CCDC58Q4VC31 RNA5SP136-201ENST00000410906 107 ntBASIC-4.32□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.32□□□□□ -3.1
CCDC58Q4VC31 RNY3P2-201ENST00000362918 102 ntBASIC-4.33□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.33□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.187-201ENST00000363918 113 ntBASIC-4.33□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.435-201ENST00000384095 112 ntBASIC-4.33□□□□□ -3.1
CCDC58Q4VC31 RNU6-345P-201ENST00000517001 107 ntBASIC-4.33□□□□□ -3.1
CCDC58Q4VC31 SNORD77.2-201ENST00000391045 68 ntBASIC-4.34□□□□□ -3.1
CCDC58Q4VC31 MIR1263-201ENST00000408324 86 ntBASIC-4.34□□□□□ -3.1
CCDC58Q4VC31 MIR1252-201ENST00000408861 65 ntBASIC-4.34□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.718-201ENST00000517110 102 ntBASIC-4.34□□□□□ -3.1
CCDC58Q4VC31 Y_RNA.84-201ENST00000363011 104 ntBASIC-4.35□□□□□ -3.11
CCDC58Q4VC31 SNORD45B-201ENST00000364617 72 ntBASIC-4.35□□□□□ -3.11
CCDC58Q4VC31 U2.14-201ENST00000615943 113 ntBASIC-4.35□□□□□ -3.11
CCDC58Q4VC31 MIR6844-201ENST00000637122 62 ntBASIC-4.35□□□□□ -3.11
CCDC58Q4VC31 RNU6-668P-201ENST00000364180 107 ntBASIC-4.36□□□□□ -3.11
CCDC58Q4VC31 RNU7-152P-201ENST00000458982 64 ntBASIC-4.36□□□□□ -3.11
CCDC58Q4VC31 SNORD115-37-201ENST00000363768 82 ntBASIC-4.37□□□□□ -3.11
CCDC58Q4VC31 Y_RNA.279-201ENST00000364763 95 ntBASIC-4.37□□□□□ -3.11
CCDC58Q4VC31 RNU6-867P-201ENST00000364956 107 ntBASIC-4.37□□□□□ -3.11
CCDC58Q4VC31 AL160413.1-201ENST00000622780 310 ntBASIC-4.37□□□□□ -3.11
CCDC58Q4VC31 Y_RNA.19-201ENST00000362462 99 ntBASIC-4.38□□□□□ -3.11
CCDC58Q4VC31 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.38□□□□□ -3.11
CCDC58Q4VC31 MIR548P-201ENST00000408336 84 ntBASIC-4.38□□□□□ -3.11
CCDC58Q4VC31 Y_RNA.668-201ENST00000516233 93 ntBASIC-4.38□□□□□ -3.11
CCDC58Q4VC31 RNU6-1153P-201ENST00000516760 105 ntBASIC-4.38□□□□□ -3.11
CCDC58Q4VC31 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.39□□□□□ -3.11
CCDC58Q4VC31 RNU6-604P-201ENST00000390917 100 ntBASIC-4.39□□□□□ -3.11
CCDC58Q4VC31 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.39□□□□□ -3.11
CCDC58Q4VC31 MIR3121-201ENST00000579680 77 ntBASIC-4.39□□□□□ -3.11
CCDC58Q4VC31 Y_RNA.47-201ENST00000362697 108 ntBASIC-4.4□□□□□ -3.11
CCDC58Q4VC31 RNA5SP215-201ENST00000363440 122 ntBASIC-4.4□□□□□ -3.11
CCDC58Q4VC31 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-4.4□□□□□ -3.11
CCDC58Q4VC31 MIR4777-201ENST00000583710 86 ntBASIC-4.4□□□□□ -3.11
CCDC58Q4VC31 MIR1236-201ENST00000408340 102 ntBASIC-4.41□□□□□ -3.12
CCDC58Q4VC31 MTND1P19-201ENST00000511780 315 ntBASIC-4.41□□□□□ -3.12
CCDC58Q4VC31 RNU7-153P-201ENST00000516455 62 ntBASIC-4.41□□□□□ -3.12
CCDC58Q4VC31 RNU7-160P-201ENST00000516660 62 ntBASIC-4.41□□□□□ -3.12
CCDC58Q4VC31 RNU6-806P-201ENST00000365147 105 ntBASIC-4.42□□□□□ -3.12
CCDC58Q4VC31 Y_RNA.387-201ENST00000383918 102 ntBASIC-4.42□□□□□ -3.12
CCDC58Q4VC31 RNU6-823P-201ENST00000391042 103 ntBASIC-4.42□□□□□ -3.12
CCDC58Q4VC31 RNU6-554P-201ENST00000410466 106 ntBASIC-4.42□□□□□ -3.12
CCDC58Q4VC31 Y_RNA.778-201ENST00000620203 90 ntBASIC-4.42□□□□□ -3.12
CCDC58Q4VC31 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.43□□□□□ -3.12
CCDC58Q4VC31 RNY3P16-201ENST00000516338 101 ntBASIC-4.43□□□□□ -3.12
CCDC58Q4VC31 RNU6-330P-201ENST00000363015 107 ntBASIC-4.44□□□□□ -3.12
CCDC58Q4VC31 MTND5P22-201ENST00000458380 195 ntBASIC-4.44□□□□□ -3.12
CCDC58Q4VC31 MIR3675-201ENST00000583661 73 ntBASIC-4.44□□□□□ -3.12
CCDC58Q4VC31 MIR3658-201ENST00000636291 56 ntBASIC-4.44□□□□□ -3.12
CCDC58Q4VC31 RNU6-450P-201ENST00000364654 107 ntBASIC-4.45□□□□□ -3.12
CCDC58Q4VC31 RNA5SP173-201ENST00000364857 136 ntBASIC-4.45□□□□□ -3.12
CCDC58Q4VC31 RNU6-590P-201ENST00000365039 107 ntBASIC-4.45□□□□□ -3.12
CCDC58Q4VC31 Y_RNA.276-201ENST00000364732 109 ntBASIC-4.46□□□□□ -3.12
CCDC58Q4VC31 SNORD58A-201ENST00000383875 65 ntBASIC-4.46□□□□□ -3.12
CCDC58Q4VC31 RNU6-1143P-201ENST00000516125 104 ntBASIC-4.46□□□□□ -3.12
CCDC58Q4VC31 MIR4426-201ENST00000640330 63 ntBASIC-4.46□□□□□ -3.12
CCDC58Q4VC31 Y_RNA.26-201ENST00000362539 101 ntBASIC-4.47□□□□□ -3.13
CCDC58Q4VC31 RNU6-493P-201ENST00000391321 108 ntBASIC-4.47□□□□□ -3.13
CCDC58Q4VC31 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-4.47□□□□□ -3.13
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms