Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.8□□□□□ -2.7
SSX1Q16384 RNU6-886P-201ENST00000384319 105 ntBASIC-1.8□□□□□ -2.7
SSX1Q16384 MT-TG-201ENST00000387429 68 ntBASIC-1.8□□□□□ -2.7
SSX1Q16384 RNU6-971P-201ENST00000516920 106 ntBASIC-1.8□□□□□ -2.7
SSX1Q16384 RNU6-537P-201ENST00000517277 103 ntBASIC-1.8□□□□□ -2.7
SSX1Q16384 RNU6-340P-201ENST00000364005 107 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 RNU6-694P-201ENST00000364071 147 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 RNU6-164P-201ENST00000364604 103 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 SNORD19-201ENST00000391191 68 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 U7.5-201ENST00000517224 61 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 AP002795.1-201ENST00000534879 84 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 MIR548AG1-201ENST00000579932 66 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 MIR4490-201ENST00000582647 84 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 MIR1246-201ENST00000636535 73 ntBASIC-1.81□□□□□ -2.7
SSX1Q16384 RNA5SP331-201ENST00000364986 107 ntBASIC-1.82□□□□□ -2.7
SSX1Q16384 RNU6-246P-201ENST00000384702 107 ntBASIC-1.82□□□□□ -2.7
SSX1Q16384 RNU7-88P-201ENST00000458752 63 ntBASIC-1.82□□□□□ -2.7
SSX1Q16384 RNU7-200P-201ENST00000516105 62 ntBASIC-1.82□□□□□ -2.7
SSX1Q16384 MIR5591-201ENST00000578248 65 ntBASIC-1.82□□□□□ -2.7
SSX1Q16384 MIR5683-201ENST00000636514 76 ntBASIC-1.82□□□□□ -2.7
SSX1Q16384 RNU6-681P-201ENST00000364012 104 ntBASIC-1.83□□□□□ -2.7
SSX1Q16384 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.83□□□□□ -2.7
SSX1Q16384 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.83□□□□□ -2.7
SSX1Q16384 MIR889-201ENST00000401280 79 ntBASIC-1.83□□□□□ -2.7
SSX1Q16384 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.83□□□□□ -2.7
SSX1Q16384 RNU6-412P-201ENST00000516434 106 ntBASIC-1.83□□□□□ -2.7
SSX1Q16384 RNU7-153P-201ENST00000516455 62 ntBASIC-1.83□□□□□ -2.7
SSX1Q16384 RNU6-656P-201ENST00000516785 107 ntBASIC-1.83□□□□□ -2.7
SSX1Q16384 AC091912.2-201ENST00000624798 167 ntBASIC-1.83□□□□□ -2.7
SSX1Q16384 MIR365A-201ENST00000362260 87 ntBASIC-1.84□□□□□ -2.7
SSX1Q16384 RNU6-226P-201ENST00000363778 107 ntBASIC-1.84□□□□□ -2.7
SSX1Q16384 MIR4441-201ENST00000582623 100 ntBASIC-1.84□□□□□ -2.7
SSX1Q16384 RNU6-774P-201ENST00000363238 107 ntBASIC-1.85□□□□□ -2.71
SSX1Q16384 RNU6-659P-201ENST00000516454 104 ntBASIC-1.85□□□□□ -2.71
SSX1Q16384 RNU6-158P-201ENST00000517104 100 ntBASIC-1.85□□□□□ -2.71
SSX1Q16384 U2.7-201ENST00000619197 100 ntBASIC-1.85□□□□□ -2.71
SSX1Q16384 RNU6-880P-201ENST00000384526 107 ntBASIC-1.86□□□□□ -2.71
SSX1Q16384 AL035461.1-201ENST00000421490 332 ntBASIC-1.86□□□□□ -2.71
SSX1Q16384 RNU7-61P-201ENST00000515897 61 ntBASIC-1.86□□□□□ -2.71
SSX1Q16384 MIR4770-201ENST00000579149 58 ntBASIC-1.86□□□□□ -2.71
SSX1Q16384 AL078595.1-201ENST00000404458 226 ntBASIC-1.87□□□□□ -2.71
SSX1Q16384 RNU6-807P-201ENST00000516805 107 ntBASIC-1.87□□□□□ -2.71
SSX1Q16384 MIR6874-201ENST00000635894 71 ntBASIC-1.87□□□□□ -2.71
SSX1Q16384 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.88□□□□□ -2.71
SSX1Q16384 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.88□□□□□ -2.71
SSX1Q16384 MIR6502-201ENST00000617296 76 ntBASIC-1.88□□□□□ -2.71
SSX1Q16384 MIR1468-201ENST00000410600 86 ntBASIC-1.89□□□□□ -2.71
SSX1Q16384 SNORD116-21-201ENST00000384507 92 ntBASIC-1.9□□□□□ -2.71
SSX1Q16384 MIR590-201ENST00000385008 97 ntBASIC-1.9□□□□□ -2.71
SSX1Q16384 SNORD77.2-201ENST00000391045 68 ntBASIC-1.9□□□□□ -2.71
SSX1Q16384 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.91□□□□□ -2.72
SSX1Q16384 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.91□□□□□ -2.72
SSX1Q16384 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.91□□□□□ -2.72
SSX1Q16384 RPL35AP4-201ENST00000412007 102 ntBASIC-1.91□□□□□ -2.72
SSX1Q16384 AC090616.4-201ENST00000448026 115 ntBASIC-1.91□□□□□ -2.72
SSX1Q16384 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.91□□□□□ -2.72
SSX1Q16384 MIR6129-201ENST00000616087 109 ntBASIC-1.91□□□□□ -2.72
SSX1Q16384 RNU6-346P-201ENST00000516288 111 ntBASIC-1.92□□□□□ -2.72
SSX1Q16384 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.92□□□□□ -2.72
SSX1Q16384 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.93□□□□□ -2.72
SSX1Q16384 SNORD115-27-201ENST00000364430 82 ntBASIC-1.93□□□□□ -2.72
SSX1Q16384 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.93□□□□□ -2.72
SSX1Q16384 RNU6-162P-201ENST00000516228 103 ntBASIC-1.93□□□□□ -2.72
SSX1Q16384 MIR4520-1-201ENST00000582609 70 ntBASIC-1.93□□□□□ -2.72
SSX1Q16384 U7.3-201ENST00000616123 62 ntBASIC-1.93□□□□□ -2.72
SSX1Q16384 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 RNU6-645P-201ENST00000364649 106 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 RNY1P5-201ENST00000383890 115 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 MIR519C-201ENST00000385053 87 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 MIR1302-5-201ENST00000408164 150 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 MIR548Q-201ENST00000408404 100 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.94□□□□□ -2.72
SSX1Q16384 RNU6-478P-201ENST00000363904 110 ntBASIC-1.95□□□□□ -2.72
SSX1Q16384 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.95□□□□□ -2.72
SSX1Q16384 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.95□□□□□ -2.72
SSX1Q16384 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.95□□□□□ -2.72
SSX1Q16384 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.95□□□□□ -2.72
SSX1Q16384 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.96□□□□□ -2.72
SSX1Q16384 MIR548C-201ENST00000384815 97 ntBASIC-1.96□□□□□ -2.72
SSX1Q16384 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
SSX1Q16384 RNU6-168P-201ENST00000516189 101 ntBASIC-1.96□□□□□ -2.72
SSX1Q16384 U4.2-201ENST00000618561 85 ntBASIC-1.96□□□□□ -2.72
SSX1Q16384 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.97□□□□□ -2.72
SSX1Q16384 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.97□□□□□ -2.72
SSX1Q16384 RNU6-458P-201ENST00000384179 107 ntBASIC-1.98□□□□□ -2.73
SSX1Q16384 RNU6-109P-201ENST00000516364 107 ntBASIC-1.98□□□□□ -2.73
SSX1Q16384 RNU6-184P-201ENST00000516514 107 ntBASIC-1.98□□□□□ -2.73
SSX1Q16384 U6.58-201ENST00000613107 107 ntBASIC-1.98□□□□□ -2.73
SSX1Q16384 AL627230.5-201ENST00000619807 58 ntBASIC-1.98□□□□□ -2.73
SSX1Q16384 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.99□□□□□ -2.73
SSX1Q16384 Y_RNA.74-201ENST00000362911 99 ntBASIC-2□□□□□ -2.73
SSX1Q16384 AC018880.2-201ENST00000414265 201 ntBASIC-2□□□□□ -2.73
SSX1Q16384 RNU7-174P-201ENST00000516248 59 ntBASIC-2□□□□□ -2.73
SSX1Q16384 RNU6-255P-201ENST00000516957 105 ntBASIC-2□□□□□ -2.73
SSX1Q16384 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 459.8 ms