Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RNA5SP86-201ENST00000390869 98 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 RNU6-795P-201ENST00000516323 103 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 MIR6509-201ENST00000614603 85 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 AC012531.4-201ENST00000616509 177 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 MIR6888-201ENST00000621977 67 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 MIR4773-1-201ENST00000637203 78 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.47□□□□□ -2.65
CNTNAP1P78357 MIR6502-201ENST00000617296 76 ntBASIC-1.47□□□□□ -2.65
CNTNAP1P78357 SNORA33.1-201ENST00000364957 130 ntBASIC-1.48□□□□□ -2.65
CNTNAP1P78357 SNORD58A-201ENST00000383875 65 ntBASIC-1.48□□□□□ -2.65
CNTNAP1P78357 MIR527-201ENST00000385244 85 ntBASIC-1.48□□□□□ -2.65
CNTNAP1P78357 MIR548A3-201ENST00000385297 97 ntBASIC-1.48□□□□□ -2.65
CNTNAP1P78357 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.48□□□□□ -2.65
CNTNAP1P78357 SNORD33.1-201ENST00000516213 88 ntBASIC-1.48□□□□□ -2.65
CNTNAP1P78357 MIR3657-201ENST00000584818 117 ntBASIC-1.48□□□□□ -2.65
CNTNAP1P78357 MIR4719-201ENST00000585233 84 ntBASIC-1.48□□□□□ -2.65
CNTNAP1P78357 RNU6-924P-201ENST00000362926 108 ntBASIC-1.49□□□□□ -2.65
CNTNAP1P78357 RNU6-80P-201ENST00000384195 107 ntBASIC-1.49□□□□□ -2.65
CNTNAP1P78357 MIR1255B2-201ENST00000408618 67 ntBASIC-1.49□□□□□ -2.65
CNTNAP1P78357 RNU6-412P-201ENST00000516434 106 ntBASIC-1.49□□□□□ -2.65
CNTNAP1P78357 RNU6-887P-201ENST00000410660 100 ntBASIC-1.5□□□□□ -2.65
CNTNAP1P78357 RNA5SP147-201ENST00000516493 109 ntBASIC-1.5□□□□□ -2.65
CNTNAP1P78357 MIR3139-201ENST00000579145 76 ntBASIC-1.5□□□□□ -2.65
CNTNAP1P78357 U6.81-201ENST00000612550 106 ntBASIC-1.5□□□□□ -2.65
CNTNAP1P78357 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.5□□□□□ -2.65
CNTNAP1P78357 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.51□□□□□ -2.65
CNTNAP1P78357 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.51□□□□□ -2.65
CNTNAP1P78357 RNU6-576P-201ENST00000390854 102 ntBASIC-1.51□□□□□ -2.65
CNTNAP1P78357 AL691482.2-201ENST00000457453 84 ntBASIC-1.51□□□□□ -2.65
CNTNAP1P78357 SCARNA23-201ENST00000516060 130 ntBASIC-1.51□□□□□ -2.65
CNTNAP1P78357 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.52□□□□□ -2.65
CNTNAP1P78357 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.52□□□□□ -2.65
CNTNAP1P78357 CYP3A54P-201ENST00000566950 75 ntBASIC-1.52□□□□□ -2.65
CNTNAP1P78357 MIR203A-201ENST00000384836 110 ntBASIC-1.53□□□□□ -2.65
CNTNAP1P78357 RNU6-904P-201ENST00000516206 101 ntBASIC-1.53□□□□□ -2.65
CNTNAP1P78357 RNU6-971P-201ENST00000516920 106 ntBASIC-1.53□□□□□ -2.65
CNTNAP1P78357 SNORD116-10-201ENST00000363791 102 ntBASIC-1.54□□□□□ -2.66
CNTNAP1P78357 RNU6-704P-201ENST00000364162 103 ntBASIC-1.54□□□□□ -2.66
CNTNAP1P78357 RNY1P5-201ENST00000383890 115 ntBASIC-1.54□□□□□ -2.66
CNTNAP1P78357 MIR521-2-201ENST00000384818 87 ntBASIC-1.54□□□□□ -2.66
CNTNAP1P78357 RNU7-154P-201ENST00000516194 62 ntBASIC-1.54□□□□□ -2.66
CNTNAP1P78357 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.55□□□□□ -2.66
CNTNAP1P78357 MIR507-201ENST00000385234 94 ntBASIC-1.55□□□□□ -2.66
CNTNAP1P78357 MT-TM-201ENST00000387377 68 ntBASIC-1.55□□□□□ -2.66
CNTNAP1P78357 RNU6-659P-201ENST00000516454 104 ntBASIC-1.55□□□□□ -2.66
CNTNAP1P78357 MIR4796-201ENST00000580742 81 ntBASIC-1.55□□□□□ -2.66
CNTNAP1P78357 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.55□□□□□ -2.66
CNTNAP1P78357 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.56□□□□□ -2.66
CNTNAP1P78357 RNU4-61P-201ENST00000411243 107 ntBASIC-1.56□□□□□ -2.66
CNTNAP1P78357 RNU6-752P-201ENST00000516376 102 ntBASIC-1.56□□□□□ -2.66
CNTNAP1P78357 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.56□□□□□ -2.66
CNTNAP1P78357 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.56□□□□□ -2.66
CNTNAP1P78357 SNORD115-33-201ENST00000363723 82 ntBASIC-1.57□□□□□ -2.66
CNTNAP1P78357 SNORA26.4-201ENST00000391188 123 ntBASIC-1.57□□□□□ -2.66
CNTNAP1P78357 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.57□□□□□ -2.66
CNTNAP1P78357 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.57□□□□□ -2.66
CNTNAP1P78357 AC108019.1-201ENST00000512540 175 ntBASIC-1.58□□□□□ -2.66
CNTNAP1P78357 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 MIR29B1-201ENST00000385015 81 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 MIR1236-201ENST00000408340 102 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 MIR4756-201ENST00000577874 78 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 MIR6739-201ENST00000622461 75 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.59□□□□□ -2.66
CNTNAP1P78357 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.6□□□□□ -2.67
CNTNAP1P78357 MIR487B-201ENST00000385021 84 ntBASIC-1.6□□□□□ -2.67
CNTNAP1P78357 RNU6-537P-201ENST00000517277 103 ntBASIC-1.6□□□□□ -2.67
CNTNAP1P78357 MIR664B-201ENST00000626756 61 ntBASIC-1.6□□□□□ -2.67
CNTNAP1P78357 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.61□□□□□ -2.67
CNTNAP1P78357 SNORA19.1-201ENST00000410656 129 ntBASIC-1.61□□□□□ -2.67
CNTNAP1P78357 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.61□□□□□ -2.67
CNTNAP1P78357 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.61□□□□□ -2.67
CNTNAP1P78357 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.61□□□□□ -2.67
CNTNAP1P78357 AC099654.10-201ENST00000640395 161 ntBASIC-1.61□□□□□ -2.67
CNTNAP1P78357 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.62□□□□□ -2.67
CNTNAP1P78357 SNORD116-21-201ENST00000384507 92 ntBASIC-1.62□□□□□ -2.67
CNTNAP1P78357 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.62□□□□□ -2.67
CNTNAP1P78357 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.63□□□□□ -2.67
CNTNAP1P78357 SNORD63.1-201ENST00000516178 80 ntBASIC-1.63□□□□□ -2.67
CNTNAP1P78357 RNU6-346P-201ENST00000516288 111 ntBASIC-1.63□□□□□ -2.67
CNTNAP1P78357 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.64□□□□□ -2.67
CNTNAP1P78357 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.64□□□□□ -2.67
CNTNAP1P78357 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.65□□□□□ -2.67
CNTNAP1P78357 RNU6-746P-201ENST00000384112 109 ntBASIC-1.65□□□□□ -2.67
CNTNAP1P78357 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.65□□□□□ -2.67
CNTNAP1P78357 MIR519A2-201ENST00000384990 87 ntBASIC-1.65□□□□□ -2.67
CNTNAP1P78357 AL021921.1-201ENST00000442774 93 ntBASIC-1.65□□□□□ -2.67
CNTNAP1P78357 AL450471.1-201ENST00000447509 127 ntBASIC-1.65□□□□□ -2.67
CNTNAP1P78357 RNU6-255P-201ENST00000516957 105 ntBASIC-1.65□□□□□ -2.67
CNTNAP1P78357 MIR6818-201ENST00000621576 65 ntBASIC-1.65□□□□□ -2.67
CNTNAP1P78357 RNU6-518P-201ENST00000516056 96 ntBASIC-1.66□□□□□ -2.68
CNTNAP1P78357 MIR6874-201ENST00000635894 71 ntBASIC-1.66□□□□□ -2.68
CNTNAP1P78357 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.66□□□□□ -2.68
CNTNAP1P78357 RNU6-681P-201ENST00000364012 104 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 SNORD116-14-201ENST00000383894 92 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 SNORD116-17-201ENST00000383929 92 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 SNORD116-15-201ENST00000384445 92 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms