Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SNORD116-16-201ENST00000384533 92 ntBASIC1□□□□□ -2.25
USP46P62068 RNU6-231P-201ENST00000517122 103 ntBASIC1□□□□□ -2.25
USP46P62068 MIR548AD-201ENST00000584780 82 ntBASIC1□□□□□ -2.25
USP46P62068 MIR6515-201ENST00000619843 57 ntBASIC1□□□□□ -2.25
USP46P62068 RNA5SP128-201ENST00000365305 116 ntBASIC0.99□□□□□ -2.25
USP46P62068 SNORD116.2-201ENST00000391251 93 ntBASIC0.99□□□□□ -2.25
USP46P62068 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
USP46P62068 RNU6-1223P-201ENST00000517124 104 ntBASIC0.99□□□□□ -2.25
USP46P62068 MIR151B-201ENST00000584249 96 ntBASIC0.99□□□□□ -2.25
USP46P62068 MIR6788-201ENST00000618842 66 ntBASIC0.99□□□□□ -2.25
USP46P62068 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
USP46P62068 MIR548J-201ENST00000408833 112 ntBASIC0.98□□□□□ -2.25
USP46P62068 RNU6-848P-201ENST00000515948 107 ntBASIC0.98□□□□□ -2.25
USP46P62068 RNU6-617P-201ENST00000516147 107 ntBASIC0.98□□□□□ -2.25
USP46P62068 RNU6-473P-201ENST00000516164 107 ntBASIC0.98□□□□□ -2.25
USP46P62068 RNU6-1049P-201ENST00000516414 107 ntBASIC0.98□□□□□ -2.25
USP46P62068 RNU6-782P-201ENST00000516852 104 ntBASIC0.98□□□□□ -2.25
USP46P62068 RN7SL660P-201ENST00000614852 299 ntBASIC0.98□□□□□ -2.25
USP46P62068 RNU6-1184P-201ENST00000384588 108 ntBASIC0.97□□□□□ -2.25
USP46P62068 MIRLET7B-201ENST00000385140 83 ntBASIC0.97□□□□□ -2.25
USP46P62068 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.97□□□□□ -2.25
USP46P62068 RNU7-154P-201ENST00000516194 62 ntBASIC0.97□□□□□ -2.25
USP46P62068 RNA5SP470-201ENST00000516463 106 ntBASIC0.97□□□□□ -2.25
USP46P62068 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
USP46P62068 MIR548AG1-201ENST00000579932 66 ntBASIC0.96□□□□□ -2.26
USP46P62068 RNU6-502P-201ENST00000362419 108 ntBASIC0.95□□□□□ -2.26
USP46P62068 MIR3925-201ENST00000584674 77 ntBASIC0.95□□□□□ -2.26
USP46P62068 RNU6-945P-201ENST00000383947 107 ntBASIC0.94□□□□□ -2.26
USP46P62068 RNA5SP480-201ENST00000516840 109 ntBASIC0.93□□□□□ -2.26
USP46P62068 AP000676.1-201ENST00000533307 52 ntBASIC0.93□□□□□ -2.26
USP46P62068 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
USP46P62068 Y_RNA.540-201ENST00000384638 111 ntBASIC0.92□□□□□ -2.26
USP46P62068 RNU6-246P-201ENST00000384702 107 ntBASIC0.92□□□□□ -2.26
USP46P62068 SCARNA11.2-201ENST00000517183 154 ntBASIC0.91□□□□□ -2.26
USP46P62068 MIR7110-201ENST00000612638 86 ntBASIC0.91□□□□□ -2.26
USP46P62068 MIR429-201ENST00000362106 83 ntBASIC0.9□□□□□ -2.27
USP46P62068 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
USP46P62068 PVT1_3.1-201ENST00000620853 95 ntBASIC0.9□□□□□ -2.27
USP46P62068 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
USP46P62068 SNORD44.1-201ENST00000363202 61 ntBASIC0.89□□□□□ -2.27
USP46P62068 Y_RNA.109-201ENST00000363215 102 ntBASIC0.89□□□□□ -2.27
USP46P62068 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
USP46P62068 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.89□□□□□ -2.27
USP46P62068 RNU6-863P-201ENST00000515989 104 ntBASIC0.89□□□□□ -2.27
USP46P62068 MIR876-201ENST00000401147 81 ntBASIC0.88□□□□□ -2.27
USP46P62068 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
USP46P62068 CYP3A137P-201ENST00000562436 69 ntBASIC0.87□□□□□ -2.27
USP46P62068 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.87□□□□□ -2.27
USP46P62068 RNU6-458P-201ENST00000384179 107 ntBASIC0.86□□□□□ -2.27
USP46P62068 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.86□□□□□ -2.27
USP46P62068 RNA5SP436-201ENST00000516020 115 ntBASIC0.86□□□□□ -2.27
USP46P62068 AL353803.5-201ENST00000599815 141 ntBASIC0.86□□□□□ -2.27
USP46P62068 U6.58-201ENST00000613107 107 ntBASIC0.86□□□□□ -2.27
USP46P62068 SNORD1B-201ENST00000363091 84 ntBASIC0.85□□□□□ -2.27
USP46P62068 SNORD114-26-201ENST00000363543 72 ntBASIC0.85□□□□□ -2.27
USP46P62068 RNU6-172P-201ENST00000411000 93 ntBASIC0.85□□□□□ -2.27
USP46P62068 MIR5000-201ENST00000577717 103 ntBASIC0.85□□□□□ -2.27
USP46P62068 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
USP46P62068 MIR103A1-201ENST00000362165 78 ntBASIC0.83□□□□□ -2.28
USP46P62068 SNORA68.3-201ENST00000515906 83 ntBASIC0.83□□□□□ -2.28
USP46P62068 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
USP46P62068 SNORA40.16-201ENST00000517238 121 ntBASIC0.83□□□□□ -2.28
USP46P62068 snoR1.1-201ENST00000628177 80 ntBASIC0.83□□□□□ -2.28
USP46P62068 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
USP46P62068 RNU6-810P-201ENST00000364001 107 ntBASIC0.82□□□□□ -2.28
USP46P62068 Y_RNA.379-201ENST00000365653 102 ntBASIC0.81□□□□□ -2.28
USP46P62068 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
USP46P62068 MIR6779-201ENST00000617283 64 ntBASIC0.81□□□□□ -2.28
USP46P62068 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
USP46P62068 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
USP46P62068 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
USP46P62068 MIR106A-201ENST00000384870 81 ntBASIC0.79□□□□□ -2.28
USP46P62068 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
USP46P62068 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.79□□□□□ -2.28
USP46P62068 RNA5SP98-201ENST00000363158 137 ntBASIC0.78□□□□□ -2.28
USP46P62068 SNORA40B-201ENST00000385573 128 ntBASIC0.78□□□□□ -2.28
USP46P62068 RNU6-127P-201ENST00000390897 107 ntBASIC0.78□□□□□ -2.28
USP46P62068 AC108740.1-201ENST00000498629 225 ntBASIC0.78□□□□□ -2.28
USP46P62068 RNA5SP121-201ENST00000516537 101 ntBASIC0.78□□□□□ -2.28
USP46P62068 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.78□□□□□ -2.28
USP46P62068 MIR4432-201ENST00000581823 84 ntBASIC0.77□□□□□ -2.29
USP46P62068 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
USP46P62068 uc_338.36-201ENST00000622331 158 ntBASIC0.77□□□□□ -2.29
USP46P62068 RNU6-753P-201ENST00000363926 107 ntBASIC0.76□□□□□ -2.29
USP46P62068 MIR643-201ENST00000385267 97 ntBASIC0.76□□□□□ -2.29
USP46P62068 RNU4-88P-201ENST00000411220 86 ntBASIC0.76□□□□□ -2.29
USP46P62068 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.76□□□□□ -2.29
USP46P62068 uc_338.17-201ENST00000619633 179 ntBASIC0.76□□□□□ -2.29
USP46P62068 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
USP46P62068 RNA5SP325-201ENST00000363756 130 ntBASIC0.75□□□□□ -2.29
USP46P62068 SNORD115-23-201ENST00000364461 82 ntBASIC0.75□□□□□ -2.29
USP46P62068 RNU6-815P-201ENST00000384080 113 ntBASIC0.75□□□□□ -2.29
USP46P62068 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
USP46P62068 MIRLET7D-201ENST00000362263 87 ntBASIC0.74□□□□□ -2.29
USP46P62068 MIR216A-201ENST00000385063 110 ntBASIC0.74□□□□□ -2.29
USP46P62068 RN7SL793P-201ENST00000583259 296 ntBASIC0.74□□□□□ -2.29
USP46P62068 AC108676.2-201ENST00000605225 163 ntBASIC0.74□□□□□ -2.29
USP46P62068 RNA5SP62-201ENST00000363457 110 ntBASIC0.73□□□□□ -2.29
USP46P62068 MIR579-201ENST00000385221 98 ntBASIC0.73□□□□□ -2.29
USP46P62068 RNU6-1133P-201ENST00000410963 100 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms