Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 HMGN2P22-201ENST00000427588 175 ntBASIC0.83□□□□□ -2.28
ZC3H6P61129 RNU4-54P-201ENST00000516428 129 ntBASIC0.83□□□□□ -2.28
ZC3H6P61129 SNORD110-201ENST00000408189 75 ntBASIC0.82□□□□□ -2.28
ZC3H6P61129 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.81□□□□□ -2.28
ZC3H6P61129 MIR330-201ENST00000362196 94 ntBASIC0.81□□□□□ -2.28
ZC3H6P61129 Y_RNA.250-201ENST00000364542 110 ntBASIC0.81□□□□□ -2.28
ZC3H6P61129 RNA5SP517-201ENST00000364724 117 ntBASIC0.81□□□□□ -2.28
ZC3H6P61129 SNORD114-4-201ENST00000363962 75 ntBASIC0.8□□□□□ -2.28
ZC3H6P61129 RNU6-302P-201ENST00000365249 107 ntBASIC0.8□□□□□ -2.28
ZC3H6P61129 SNORA40.8-201ENST00000411034 126 ntBASIC0.8□□□□□ -2.28
ZC3H6P61129 RNU6-1232P-201ENST00000516299 86 ntBASIC0.8□□□□□ -2.28
ZC3H6P61129 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
ZC3H6P61129 Y_RNA.68-201ENST00000362881 102 ntBASIC0.79□□□□□ -2.28
ZC3H6P61129 MIR516B1-201ENST00000385211 90 ntBASIC0.79□□□□□ -2.28
ZC3H6P61129 SNORA49-201ENST00000386157 136 ntBASIC0.79□□□□□ -2.28
ZC3H6P61129 AC069271.1-201ENST00000445577 156 ntBASIC0.79□□□□□ -2.28
ZC3H6P61129 SNORA25.18-201ENST00000607153 114 ntBASIC0.79□□□□□ -2.28
ZC3H6P61129 RNA5SP257-201ENST00000363023 116 ntBASIC0.78□□□□□ -2.28
ZC3H6P61129 RNU4-88P-201ENST00000411220 86 ntBASIC0.78□□□□□ -2.28
ZC3H6P61129 CYP3A54P-201ENST00000566950 75 ntBASIC0.78□□□□□ -2.28
ZC3H6P61129 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
ZC3H6P61129 Y_RNA.246-201ENST00000364495 108 ntBASIC0.77□□□□□ -2.29
ZC3H6P61129 RNU6-518P-201ENST00000516056 96 ntBASIC0.77□□□□□ -2.29
ZC3H6P61129 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
ZC3H6P61129 SNORA15B-2-201ENST00000384058 135 ntBASIC0.76□□□□□ -2.29
ZC3H6P61129 SNORA15B-1-201ENST00000384334 135 ntBASIC0.76□□□□□ -2.29
ZC3H6P61129 RNU6-337P-201ENST00000391243 106 ntBASIC0.76□□□□□ -2.29
ZC3H6P61129 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
ZC3H6P61129 uc_338.10-201ENST00000621872 182 ntBASIC0.76□□□□□ -2.29
ZC3H6P61129 MIR519A2-201ENST00000384990 87 ntBASIC0.75□□□□□ -2.29
ZC3H6P61129 MIR1255B2-201ENST00000408618 67 ntBASIC0.75□□□□□ -2.29
ZC3H6P61129 RNU6-231P-201ENST00000517122 103 ntBASIC0.75□□□□□ -2.29
ZC3H6P61129 MIR2909-201ENST00000617113 69 ntBASIC0.75□□□□□ -2.29
ZC3H6P61129 U6.96-201ENST00000636425 70 ntBASIC0.75□□□□□ -2.29
ZC3H6P61129 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
ZC3H6P61129 MIR518A1-201ENST00000385068 85 ntBASIC0.74□□□□□ -2.29
ZC3H6P61129 SNORA40.16-201ENST00000517238 121 ntBASIC0.74□□□□□ -2.29
ZC3H6P61129 Y_RNA.282-201ENST00000364793 102 ntBASIC0.73□□□□□ -2.29
ZC3H6P61129 RNU6-175P-201ENST00000516896 107 ntBASIC0.72□□□□□ -2.29
ZC3H6P61129 RNU7-188P-201ENST00000517063 64 ntBASIC0.72□□□□□ -2.29
ZC3H6P61129 AC243829.6-201ENST00000612652 106 ntBASIC0.72□□□□□ -2.29
ZC3H6P61129 MIR5087-201ENST00000635826 76 ntBASIC0.72□□□□□ -2.29
ZC3H6P61129 RNU6-808P-201ENST00000391233 108 ntBASIC0.71□□□□□ -2.3
ZC3H6P61129 SNORD116.2-201ENST00000391251 93 ntBASIC0.71□□□□□ -2.3
ZC3H6P61129 RNU6-980P-201ENST00000516925 103 ntBASIC0.71□□□□□ -2.3
ZC3H6P61129 MIR6755-201ENST00000619993 66 ntBASIC0.71□□□□□ -2.3
ZC3H6P61129 SNORD1B-201ENST00000363091 84 ntBASIC0.7□□□□□ -2.3
ZC3H6P61129 RNU6-753P-201ENST00000363926 107 ntBASIC0.7□□□□□ -2.3
ZC3H6P61129 Y_RNA.423-201ENST00000384057 113 ntBASIC0.7□□□□□ -2.3
ZC3H6P61129 RNU6-35P-201ENST00000384530 107 ntBASIC0.7□□□□□ -2.3
ZC3H6P61129 SNORD116-16-201ENST00000384533 92 ntBASIC0.7□□□□□ -2.3
ZC3H6P61129 MIR501-201ENST00000390204 84 ntBASIC0.7□□□□□ -2.3
ZC3H6P61129 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.7□□□□□ -2.3
ZC3H6P61129 MIR6773-201ENST00000612812 74 ntBASIC0.7□□□□□ -2.3
ZC3H6P61129 SNORD118-201ENST00000363593 134 ntBASIC0.69□□□□□ -2.3
ZC3H6P61129 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
ZC3H6P61129 Y_RNA.109-201ENST00000363215 102 ntBASIC0.68□□□□□ -2.3
ZC3H6P61129 Y_RNA.379-201ENST00000365653 102 ntBASIC0.68□□□□□ -2.3
ZC3H6P61129 AL021921.1-201ENST00000442774 93 ntBASIC0.68□□□□□ -2.3
ZC3H6P61129 Y_RNA.74-201ENST00000362911 99 ntBASIC0.67□□□□□ -2.3
ZC3H6P61129 RNU6-520P-201ENST00000384717 104 ntBASIC0.67□□□□□ -2.3
ZC3H6P61129 MIR527-201ENST00000385244 85 ntBASIC0.67□□□□□ -2.3
ZC3H6P61129 SNORD115-25-201ENST00000362619 82 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 RNU6-810P-201ENST00000364001 107 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 MIRLET7B-201ENST00000385140 83 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 AC114737.2-201ENST00000421583 173 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 AC244090.1-201ENST00000441884 93 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 SNORA68.3-201ENST00000515906 83 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 MIR4677-201ENST00000584153 80 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 RN7SL660P-201ENST00000614852 299 ntBASIC0.66□□□□□ -2.3
ZC3H6P61129 MIR20A-201ENST00000362279 71 ntBASIC0.65□□□□□ -2.31
ZC3H6P61129 RNA5SP62-201ENST00000363457 110 ntBASIC0.65□□□□□ -2.31
ZC3H6P61129 RNU6-1036P-201ENST00000383959 104 ntBASIC0.65□□□□□ -2.31
ZC3H6P61129 Y_RNA.433-201ENST00000384089 102 ntBASIC0.65□□□□□ -2.31
ZC3H6P61129 RNU6-172P-201ENST00000411000 93 ntBASIC0.65□□□□□ -2.31
ZC3H6P61129 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.64□□□□□ -2.31
ZC3H6P61129 RNU6-782P-201ENST00000516852 104 ntBASIC0.64□□□□□ -2.31
ZC3H6P61129 MIR3925-201ENST00000584674 77 ntBASIC0.64□□□□□ -2.31
ZC3H6P61129 RNU6-502P-201ENST00000362419 108 ntBASIC0.63□□□□□ -2.31
ZC3H6P61129 VTRNA1-3-201ENST00000365645 89 ntBASIC0.63□□□□□ -2.31
ZC3H6P61129 MIR579-201ENST00000385221 98 ntBASIC0.63□□□□□ -2.31
ZC3H6P61129 MIR4514-201ENST00000581410 57 ntBASIC0.63□□□□□ -2.31
ZC3H6P61129 MIR4490-201ENST00000582647 84 ntBASIC0.63□□□□□ -2.31
ZC3H6P61129 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.63□□□□□ -2.31
ZC3H6P61129 U2.18-201ENST00000622185 84 ntBASIC0.63□□□□□ -2.31
ZC3H6P61129 SNORA2A-201ENST00000383885 135 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 RNU6-458P-201ENST00000384179 107 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 SNORA40B-201ENST00000385573 128 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 RNU7-119P-201ENST00000459279 63 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 RNU6-863P-201ENST00000515989 104 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 MIR5706-201ENST00000579841 80 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 MIR7110-201ENST00000612638 86 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 U6.58-201ENST00000613107 107 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 MIR499B-201ENST00000636498 73 ntBASIC0.62□□□□□ -2.31
ZC3H6P61129 MIRLET7D-201ENST00000362263 87 ntBASIC0.61□□□□□ -2.31
ZC3H6P61129 RNU6-598P-201ENST00000364017 105 ntBASIC0.61□□□□□ -2.31
ZC3H6P61129 SNORD114-29-201ENST00000364819 70 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms