Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MIR1255B2-201ENST00000408618 67 ntBASIC-0.76□□□□□ -2.53
VCPP55072 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.76□□□□□ -2.53
VCPP55072 SNORD18.2-201ENST00000459604 70 ntBASIC-0.76□□□□□ -2.53
VCPP55072 RNU7-61P-201ENST00000515897 61 ntBASIC-0.76□□□□□ -2.53
VCPP55072 AC006254.2-201ENST00000603259 279 ntBASIC-0.76□□□□□ -2.53
VCPP55072 MIR4773-1-201ENST00000637203 78 ntBASIC-0.76□□□□□ -2.53
VCPP55072 RNU5F-1-201ENST00000362507 117 ntBASIC-0.77□□□□□ -2.53
VCPP55072 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.77□□□□□ -2.53
VCPP55072 RNA5SP192-201ENST00000364404 120 ntBASIC-0.77□□□□□ -2.53
VCPP55072 SNORD115-27-201ENST00000364430 82 ntBASIC-0.77□□□□□ -2.53
VCPP55072 SNORD115-22-201ENST00000364456 82 ntBASIC-0.77□□□□□ -2.53
VCPP55072 RNU6-106P-201ENST00000384405 107 ntBASIC-0.77□□□□□ -2.53
VCPP55072 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.77□□□□□ -2.53
VCPP55072 RNU6-554P-201ENST00000410466 106 ntBASIC-0.77□□□□□ -2.53
VCPP55072 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.77□□□□□ -2.53
VCPP55072 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.77□□□□□ -2.53
VCPP55072 U6.81-201ENST00000612550 106 ntBASIC-0.77□□□□□ -2.53
VCPP55072 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.77□□□□□ -2.53
VCPP55072 snoR1.1-201ENST00000628177 80 ntBASIC-0.77□□□□□ -2.53
VCPP55072 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.78□□□□□ -2.53
VCPP55072 MIR548M-201ENST00000408260 86 ntBASIC-0.78□□□□□ -2.53
VCPP55072 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.78□□□□□ -2.53
VCPP55072 CYP3A54P-201ENST00000566950 75 ntBASIC-0.78□□□□□ -2.53
VCPP55072 MIR6129-201ENST00000616087 109 ntBASIC-0.78□□□□□ -2.53
VCPP55072 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.78□□□□□ -2.53
VCPP55072 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.79□□□□□ -2.54
VCPP55072 RNU2-51P-201ENST00000410708 197 ntBASIC-0.79□□□□□ -2.54
VCPP55072 RNU6-109P-201ENST00000516364 107 ntBASIC-0.79□□□□□ -2.54
VCPP55072 RNU6-184P-201ENST00000516514 107 ntBASIC-0.79□□□□□ -2.54
VCPP55072 AP002795.1-201ENST00000534879 84 ntBASIC-0.79□□□□□ -2.54
VCPP55072 MIR6509-201ENST00000614603 85 ntBASIC-0.79□□□□□ -2.54
VCPP55072 SNORA19-201ENST00000384737 128 ntBASIC-0.8□□□□□ -2.54
VCPP55072 MIR519A2-201ENST00000384990 87 ntBASIC-0.8□□□□□ -2.54
VCPP55072 SNORD63.1-201ENST00000516178 80 ntBASIC-0.8□□□□□ -2.54
VCPP55072 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.8□□□□□ -2.54
VCPP55072 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.81□□□□□ -2.54
VCPP55072 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.81□□□□□ -2.54
VCPP55072 SNORD83B-201ENST00000386745 93 ntBASIC-0.81□□□□□ -2.54
VCPP55072 MIR1236-201ENST00000408340 102 ntBASIC-0.81□□□□□ -2.54
VCPP55072 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.81□□□□□ -2.54
VCPP55072 RNU6-162P-201ENST00000516228 103 ntBASIC-0.81□□□□□ -2.54
VCPP55072 MIR4796-201ENST00000580742 81 ntBASIC-0.81□□□□□ -2.54
VCPP55072 U7.3-201ENST00000616123 62 ntBASIC-0.81□□□□□ -2.54
VCPP55072 uc_338.19-201ENST00000616808 99 ntBASIC-0.81□□□□□ -2.54
VCPP55072 RNU6-834P-201ENST00000362367 110 ntBASIC-0.82□□□□□ -2.54
VCPP55072 SNORA2.1-201ENST00000363089 137 ntBASIC-0.82□□□□□ -2.54
VCPP55072 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.82□□□□□ -2.54
VCPP55072 MIR3115-201ENST00000577915 68 ntBASIC-0.82□□□□□ -2.54
VCPP55072 SNORA62.4-201ENST00000365504 151 ntBASIC-0.83□□□□□ -2.54
VCPP55072 RNU6-22P-201ENST00000384355 107 ntBASIC-0.83□□□□□ -2.54
VCPP55072 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.83□□□□□ -2.54
VCPP55072 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.83□□□□□ -2.54
VCPP55072 RNA5SP470-201ENST00000516463 106 ntBASIC-0.83□□□□□ -2.54
VCPP55072 RNU6-589P-201ENST00000516485 107 ntBASIC-0.83□□□□□ -2.54
VCPP55072 MIR3165-201ENST00000579874 75 ntBASIC-0.83□□□□□ -2.54
VCPP55072 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.83□□□□□ -2.54
VCPP55072 RNY4P7-201ENST00000364600 96 ntBASIC-0.84□□□□□ -2.54
VCPP55072 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.84□□□□□ -2.54
VCPP55072 MIR521-2-201ENST00000384818 87 ntBASIC-0.84□□□□□ -2.54
VCPP55072 AC140658.3-201ENST00000567603 271 ntBASIC-0.84□□□□□ -2.54
VCPP55072 MIR6739-201ENST00000622461 75 ntBASIC-0.84□□□□□ -2.54
VCPP55072 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.84□□□□□ -2.54
VCPP55072 RNA5SP26-201ENST00000362406 119 ntBASIC-0.85□□□□□ -2.55
VCPP55072 RNU6-766P-201ENST00000362478 107 ntBASIC-0.85□□□□□ -2.55
VCPP55072 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.85□□□□□ -2.55
VCPP55072 RNU6-246P-201ENST00000384702 107 ntBASIC-0.85□□□□□ -2.55
VCPP55072 AL691482.2-201ENST00000457453 84 ntBASIC-0.85□□□□□ -2.55
VCPP55072 RNU6-656P-201ENST00000516785 107 ntBASIC-0.85□□□□□ -2.55
VCPP55072 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.86□□□□□ -2.55
VCPP55072 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.86□□□□□ -2.55
VCPP55072 SNORD19-201ENST00000391191 68 ntBASIC-0.86□□□□□ -2.55
VCPP55072 MIR8485-201ENST00000401372 91 ntBASIC-0.86□□□□□ -2.55
VCPP55072 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
VCPP55072 RNU6-340P-201ENST00000364005 107 ntBASIC-0.87□□□□□ -2.55
VCPP55072 RNU6-274P-201ENST00000459566 107 ntBASIC-0.87□□□□□ -2.55
VCPP55072 RNU6-330P-201ENST00000363015 107 ntBASIC-0.88□□□□□ -2.55
VCPP55072 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.88□□□□□ -2.55
VCPP55072 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.88□□□□□ -2.55
VCPP55072 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.88□□□□□ -2.55
VCPP55072 U2.7-201ENST00000619197 100 ntBASIC-0.88□□□□□ -2.55
VCPP55072 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.89□□□□□ -2.55
VCPP55072 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.89□□□□□ -2.55
VCPP55072 RNU6-24P-201ENST00000384440 107 ntBASIC-0.89□□□□□ -2.55
VCPP55072 SNORA26.4-201ENST00000391188 123 ntBASIC-0.89□□□□□ -2.55
VCPP55072 RNU6-518P-201ENST00000516056 96 ntBASIC-0.89□□□□□ -2.55
VCPP55072 RNU6-479P-201ENST00000516348 105 ntBASIC-0.89□□□□□ -2.55
VCPP55072 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.89□□□□□ -2.55
VCPP55072 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.89□□□□□ -2.55
VCPP55072 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.9□□□□□ -2.55
VCPP55072 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
VCPP55072 AL035461.1-201ENST00000421490 332 ntBASIC-0.9□□□□□ -2.55
VCPP55072 MTATP8P2-201ENST00000435212 202 ntBASIC-0.9□□□□□ -2.55
VCPP55072 RNU7-154P-201ENST00000516194 62 ntBASIC-0.9□□□□□ -2.55
VCPP55072 RNU6-313P-201ENST00000516317 112 ntBASIC-0.9□□□□□ -2.55
VCPP55072 MIR6818-201ENST00000621576 65 ntBASIC-0.9□□□□□ -2.55
VCPP55072 RNU6-497P-201ENST00000365316 104 ntBASIC-0.91□□□□□ -2.56
VCPP55072 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.91□□□□□ -2.56
VCPP55072 AL450471.1-201ENST00000447509 127 ntBASIC-0.91□□□□□ -2.56
VCPP55072 RNU7-88P-201ENST00000458752 63 ntBASIC-0.91□□□□□ -2.56
VCPP55072 SNORD115-33-201ENST00000363723 82 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms