Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-656P-201ENST00000516785 107 ntBASIC-2.43□□□□□ -2.8
NUP98P52948 RNU5F-1-201ENST00000362507 117 ntBASIC-2.44□□□□□ -2.8
NUP98P52948 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.44□□□□□ -2.8
NUP98P52948 RNU6-519P-201ENST00000410590 108 ntBASIC-2.44□□□□□ -2.8
NUP98P52948 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.44□□□□□ -2.8
NUP98P52948 SNORD45B-201ENST00000364617 72 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 MIR548I1-201ENST00000408810 149 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 AC012531.4-201ENST00000616509 177 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 RNU6-247P-201ENST00000362636 107 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 RNU6-681P-201ENST00000364012 104 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 RNU6-474P-201ENST00000384243 107 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.45□□□□□ -2.8
NUP98P52948 RNU6-985P-201ENST00000410182 104 ntBASIC-2.45□□□□□ -2.8
NUP98P52948 SNORD60-201ENST00000383903 83 ntBASIC-2.46□□□□□ -2.8
NUP98P52948 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.46□□□□□ -2.8
NUP98P52948 RNU6-918P-201ENST00000391219 106 ntBASIC-2.46□□□□□ -2.8
NUP98P52948 RNU6-141P-201ENST00000410499 105 ntBASIC-2.46□□□□□ -2.8
NUP98P52948 RNU7-121P-201ENST00000516604 62 ntBASIC-2.46□□□□□ -2.8
NUP98P52948 MIR429-201ENST00000362106 83 ntBASIC-2.47□□□□□ -2.8
NUP98P52948 MIR513C-201ENST00000401352 84 ntBASIC-2.47□□□□□ -2.8
NUP98P52948 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.47□□□□□ -2.81
NUP98P52948 SNORA27.2-201ENST00000363365 126 ntBASIC-2.47□□□□□ -2.81
NUP98P52948 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.47□□□□□ -2.81
NUP98P52948 RNU6-995P-201ENST00000391244 107 ntBASIC-2.47□□□□□ -2.81
NUP98P52948 MTND2P23-201ENST00000422990 651 ntBASIC-2.47□□□□□ -2.81
NUP98P52948 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.47□□□□□ -2.81
NUP98P52948 MIR4680-201ENST00000580906 66 ntBASIC-2.47□□□□□ -2.81
NUP98P52948 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.48□□□□□ -2.81
NUP98P52948 U2.7-201ENST00000619197 100 ntBASIC-2.48□□□□□ -2.81
NUP98P52948 MTND3P2-201ENST00000438452 342 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 MIR4694-201ENST00000578534 80 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 MIR4795-201ENST00000584182 89 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 AC134503.1-201ENST00000633048 54 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 MIR3658-201ENST00000636291 56 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 RNU6-635P-201ENST00000516651 102 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.49□□□□□ -2.81
NUP98P52948 RNU6-807P-201ENST00000516805 107 ntBASIC-2.5□□□□□ -2.81
NUP98P52948 U2.18-201ENST00000622185 84 ntBASIC-2.5□□□□□ -2.81
NUP98P52948 MIR5693-201ENST00000577722 73 ntBASIC-2.51□□□□□ -2.81
NUP98P52948 MIR3613-201ENST00000579844 87 ntBASIC-2.51□□□□□ -2.81
NUP98P52948 RNY4P10-201ENST00000365571 96 ntBASIC-2.52□□□□□ -2.81
NUP98P52948 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.52□□□□□ -2.81
NUP98P52948 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.52□□□□□ -2.81
NUP98P52948 RNY4P25-201ENST00000459254 96 ntBASIC-2.52□□□□□ -2.81
NUP98P52948 RNY1P1-201ENST00000364372 112 ntBASIC-2.53□□□□□ -2.81
NUP98P52948 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.53□□□□□ -2.81
NUP98P52948 SNORD113-3-201ENST00000364830 72 ntBASIC-2.54□□□□□ -2.82
NUP98P52948 MIR8062-201ENST00000621515 85 ntBASIC-2.54□□□□□ -2.82
NUP98P52948 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.54□□□□□ -2.82
NUP98P52948 SNORD58.1-201ENST00000391313 66 ntBASIC-2.54□□□□□ -2.82
NUP98P52948 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.54□□□□□ -2.82
NUP98P52948 MIR379-201ENST00000362218 67 ntBASIC-2.55□□□□□ -2.82
NUP98P52948 RNU6-813P-201ENST00000384691 107 ntBASIC-2.55□□□□□ -2.82
NUP98P52948 MIR581-201ENST00000384895 96 ntBASIC-2.55□□□□□ -2.82
NUP98P52948 RNU7-174P-201ENST00000516248 59 ntBASIC-2.55□□□□□ -2.82
NUP98P52948 RNU7-151P-201ENST00000516930 53 ntBASIC-2.55□□□□□ -2.82
NUP98P52948 RNY3P2-201ENST00000362918 102 ntBASIC-2.56□□□□□ -2.82
NUP98P52948 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.56□□□□□ -2.82
NUP98P52948 RNU6-587P-201ENST00000391282 106 ntBASIC-2.56□□□□□ -2.82
NUP98P52948 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.56□□□□□ -2.82
NUP98P52948 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.56□□□□□ -2.82
NUP98P52948 RNU6-912P-201ENST00000363800 104 ntBASIC-2.56□□□□□ -2.82
NUP98P52948 RNY3P8-201ENST00000411366 126 ntBASIC-2.56□□□□□ -2.82
NUP98P52948 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.57□□□□□ -2.82
NUP98P52948 RNU6-669P-201ENST00000365575 107 ntBASIC-2.57□□□□□ -2.82
NUP98P52948 AC103810.7-201ENST00000607821 91 ntBASIC-2.57□□□□□ -2.82
NUP98P52948 AC025166.1-201ENST00000612411 163 ntBASIC-2.57□□□□□ -2.82
NUP98P52948 RNU6-598P-201ENST00000364017 105 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 MIR509-1-201ENST00000385265 94 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 MIR509-2-201ENST00000390724 91 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 MTND5P20-201ENST00000448677 143 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 RNA5SP106-201ENST00000517274 100 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 RNU6-645P-201ENST00000364649 106 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 RNU6-915P-201ENST00000364943 103 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 SNORA33.2-201ENST00000365413 134 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 SNORD58A-201ENST00000383875 65 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 RNU6-460P-201ENST00000391158 108 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 RNU6-752P-201ENST00000516376 102 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 MIR4679-2-201ENST00000578358 77 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 U4.4-201ENST00000620626 117 ntBASIC-2.58□□□□□ -2.82
NUP98P52948 RNU4-71P-201ENST00000516258 113 ntBASIC-2.59□□□□□ -2.82
NUP98P52948 MIR3144-201ENST00000579460 79 ntBASIC-2.59□□□□□ -2.82
NUP98P52948 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.6□□□□□ -2.83
NUP98P52948 RNU6-106P-201ENST00000384405 107 ntBASIC-2.6□□□□□ -2.83
NUP98P52948 SNORD90-201ENST00000391145 111 ntBASIC-2.6□□□□□ -2.83
NUP98P52948 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.6□□□□□ -2.83
NUP98P52948 MIR3171-201ENST00000584270 74 ntBASIC-2.6□□□□□ -2.83
NUP98P52948 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.61□□□□□ -2.83
NUP98P52948 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.61□□□□□ -2.83
NUP98P52948 MIR548N-201ENST00000408742 75 ntBASIC-2.61□□□□□ -2.83
NUP98P52948 RNU6-698P-201ENST00000363523 107 ntBASIC-2.61□□□□□ -2.83
NUP98P52948 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.61□□□□□ -2.83
NUP98P52948 RNU6-34P-201ENST00000364874 107 ntBASIC-2.61□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms