Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 RNU7-55P-201ENST00000459426 62 ntBASIC-0.16□□□□□ -2.44
HOXA1P49639 RNA5SP285-201ENST00000516619 119 ntBASIC-0.16□□□□□ -2.44
HOXA1P49639 RNU6-303P-201ENST00000517091 106 ntBASIC-0.16□□□□□ -2.44
HOXA1P49639 MIR4280-201ENST00000582178 76 ntBASIC-0.16□□□□□ -2.44
HOXA1P49639 MIR664A-201ENST00000626086 82 ntBASIC-0.16□□□□□ -2.44
HOXA1P49639 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.17□□□□□ -2.44
HOXA1P49639 RNA5SP300-201ENST00000391197 107 ntBASIC-0.17□□□□□ -2.44
HOXA1P49639 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.17□□□□□ -2.44
HOXA1P49639 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.17□□□□□ -2.44
HOXA1P49639 MIR4432-201ENST00000581823 84 ntBASIC-0.17□□□□□ -2.44
HOXA1P49639 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.17□□□□□ -2.44
HOXA1P49639 RNA5SP173-201ENST00000364857 136 ntBASIC-0.18□□□□□ -2.44
HOXA1P49639 RNU6-46P-201ENST00000383860 107 ntBASIC-0.18□□□□□ -2.44
HOXA1P49639 SNORA8.1-201ENST00000384250 140 ntBASIC-0.18□□□□□ -2.44
HOXA1P49639 SNORA26.2-201ENST00000390922 122 ntBASIC-0.18□□□□□ -2.44
HOXA1P49639 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.18□□□□□ -2.44
HOXA1P49639 MIR4712-201ENST00000583750 82 ntBASIC-0.18□□□□□ -2.44
HOXA1P49639 U6.96-201ENST00000636425 70 ntBASIC-0.18□□□□□ -2.44
HOXA1P49639 SNORA18.1-201ENST00000363418 128 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 RNU6-900P-201ENST00000384498 102 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 MIR196A2-201ENST00000385189 110 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 RNU6-721P-201ENST00000410155 105 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 AC096531.1-201ENST00000419107 107 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 AC074348.1-201ENST00000426503 132 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 RNU6-752P-201ENST00000516376 102 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 MIR3666-201ENST00000607845 111 ntBASIC-0.19□□□□□ -2.44
HOXA1P49639 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.2□□□□□ -2.44
HOXA1P49639 RNU6-982P-201ENST00000516216 102 ntBASIC-0.2□□□□□ -2.44
HOXA1P49639 RNU6-881P-201ENST00000516813 102 ntBASIC-0.2□□□□□ -2.44
HOXA1P49639 MIR4666B-201ENST00000578142 81 ntBASIC-0.2□□□□□ -2.44
HOXA1P49639 MIR6851-201ENST00000617060 67 ntBASIC-0.2□□□□□ -2.44
HOXA1P49639 MIR6888-201ENST00000621977 67 ntBASIC-0.2□□□□□ -2.44
HOXA1P49639 AL391099.1-201ENST00000624635 187 ntBASIC-0.2□□□□□ -2.44
HOXA1P49639 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.21□□□□□ -2.44
HOXA1P49639 RNU6-973P-201ENST00000364690 107 ntBASIC-0.21□□□□□ -2.44
HOXA1P49639 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
HOXA1P49639 MIR1255B2-201ENST00000408618 67 ntBASIC-0.21□□□□□ -2.44
HOXA1P49639 SCARNA18B-201ENST00000458806 135 ntBASIC-0.21□□□□□ -2.44
HOXA1P49639 SNORD2-201ENST00000459163 69 ntBASIC-0.21□□□□□ -2.44
HOXA1P49639 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.21□□□□□ -2.44
HOXA1P49639 RNU6-656P-201ENST00000516785 107 ntBASIC-0.21□□□□□ -2.44
HOXA1P49639 RNA5SP66-201ENST00000517178 101 ntBASIC-0.21□□□□□ -2.44
HOXA1P49639 MIR1245B-201ENST00000636115 69 ntBASIC-0.21□□□□□ -2.44
HOXA1P49639 RNU6-315P-201ENST00000362666 107 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 SNORD114-31-201ENST00000363219 75 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 MIR214-201ENST00000385214 110 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 RNU6-604P-201ENST00000390917 100 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 SNORD126-201ENST00000459475 77 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.22□□□□□ -2.44
HOXA1P49639 MIR3675-201ENST00000583661 73 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 AL353803.5-201ENST00000599815 141 ntBASIC-0.22□□□□□ -2.44
HOXA1P49639 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.23□□□□□ -2.45
HOXA1P49639 RNU6-284P-201ENST00000411105 106 ntBASIC-0.23□□□□□ -2.45
HOXA1P49639 SNORD22.1-201ENST00000516331 125 ntBASIC-0.23□□□□□ -2.45
HOXA1P49639 RNU6-320P-201ENST00000516511 106 ntBASIC-0.23□□□□□ -2.45
HOXA1P49639 MIR6759-201ENST00000638110 65 ntBASIC-0.23□□□□□ -2.45
HOXA1P49639 RNA5SP275-201ENST00000363936 118 ntBASIC-0.24□□□□□ -2.45
HOXA1P49639 RNU6-901P-201ENST00000384593 106 ntBASIC-0.24□□□□□ -2.45
HOXA1P49639 MIR519A2-201ENST00000384990 87 ntBASIC-0.24□□□□□ -2.45
HOXA1P49639 SNORA3B-201ENST00000391305 131 ntBASIC-0.24□□□□□ -2.45
HOXA1P49639 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.24□□□□□ -2.45
HOXA1P49639 MIR8064-201ENST00000612863 90 ntBASIC-0.24□□□□□ -2.45
HOXA1P49639 MIR6854-201ENST00000614935 69 ntBASIC-0.24□□□□□ -2.45
HOXA1P49639 AC093726.3-201ENST00000637588 150 ntBASIC-0.24□□□□□ -2.45
HOXA1P49639 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 RNU6-645P-201ENST00000364649 106 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 MIR124-2-201ENST00000385081 109 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 IGLVI-20-201ENST00000519296 130 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 CYP3A54P-201ENST00000566950 75 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 AL445584.3-201ENST00000617173 78 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 U2.7-201ENST00000619197 100 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 MIR6739-201ENST00000622461 75 ntBASIC-0.25□□□□□ -2.45
HOXA1P49639 SNORD45.1-201ENST00000363181 77 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 SNORD45A-201ENST00000384512 84 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 RNU6-246P-201ENST00000384702 107 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 MIR521-2-201ENST00000384818 87 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 MIR517B-201ENST00000385102 67 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 RNU6-380P-201ENST00000410207 107 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 AP000533.3-201ENST00000447704 118 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 RNU6-518P-201ENST00000516056 96 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 RNU6-807P-201ENST00000516805 107 ntBASIC-0.26□□□□□ -2.45
HOXA1P49639 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 SNORD115-22-201ENST00000364456 82 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 SNORD14C-201ENST00000365382 88 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 RPS29P8-201ENST00000445109 171 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 AL500527.2-201ENST00000454105 95 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 AP002795.1-201ENST00000534879 84 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 MIR3179-1-201ENST00000578940 84 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 MIR3179-2-201ENST00000579107 84 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 MIR3179-3-201ENST00000579566 84 ntBASIC-0.27□□□□□ -2.45
HOXA1P49639 MIR3179-4-201ENST00000617599 84 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms