Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 SNORA3B-201ENST00000391305 131 ntBASIC-0.57□□□□□ -2.5
RPA1P27694 MIR1255B2-201ENST00000408618 67 ntBASIC-0.57□□□□□ -2.5
RPA1P27694 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.57□□□□□ -2.5
RPA1P27694 AC093729.1-201ENST00000513074 128 ntBASIC-0.57□□□□□ -2.5
RPA1P27694 CYP3A54P-201ENST00000566950 75 ntBASIC-0.57□□□□□ -2.5
RPA1P27694 MIR548AG1-201ENST00000579932 66 ntBASIC-0.57□□□□□ -2.5
RPA1P27694 YWHAEP3-201ENST00000582767 121 ntBASIC-0.57□□□□□ -2.5
RPA1P27694 MIR6888-201ENST00000621977 67 ntBASIC-0.57□□□□□ -2.5
RPA1P27694 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.58□□□□□ -2.5
RPA1P27694 RNU6-675P-201ENST00000384236 104 ntBASIC-0.59□□□□□ -2.5
RPA1P27694 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
RPA1P27694 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.59□□□□□ -2.5
RPA1P27694 AL353803.5-201ENST00000599815 141 ntBASIC-0.59□□□□□ -2.5
RPA1P27694 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.6□□□□□ -2.51
RPA1P27694 MIR204-201ENST00000385200 110 ntBASIC-0.6□□□□□ -2.51
RPA1P27694 RNU6-656P-201ENST00000516785 107 ntBASIC-0.6□□□□□ -2.51
RPA1P27694 RNU6-844P-201ENST00000517175 102 ntBASIC-0.6□□□□□ -2.51
RPA1P27694 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.6□□□□□ -2.51
RPA1P27694 MIR6739-201ENST00000622461 75 ntBASIC-0.6□□□□□ -2.51
RPA1P27694 snoR1.1-201ENST00000628177 80 ntBASIC-0.6□□□□□ -2.51
RPA1P27694 AC006160.2-201ENST00000637708 154 ntBASIC-0.6□□□□□ -2.51
RPA1P27694 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.61□□□□□ -2.51
RPA1P27694 RNU6-153P-201ENST00000364422 104 ntBASIC-0.61□□□□□ -2.51
RPA1P27694 MIR521-2-201ENST00000384818 87 ntBASIC-0.61□□□□□ -2.51
RPA1P27694 MIR604-201ENST00000384880 94 ntBASIC-0.61□□□□□ -2.51
RPA1P27694 MIR124-2-201ENST00000385081 109 ntBASIC-0.61□□□□□ -2.51
RPA1P27694 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.61□□□□□ -2.51
RPA1P27694 RNA5SP368-201ENST00000364298 116 ntBASIC-0.62□□□□□ -2.51
RPA1P27694 MIR518B-201ENST00000385127 83 ntBASIC-0.62□□□□□ -2.51
RPA1P27694 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
RPA1P27694 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
RPA1P27694 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
RPA1P27694 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
RPA1P27694 MIR519A2-201ENST00000384990 87 ntBASIC-0.63□□□□□ -2.51
RPA1P27694 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.63□□□□□ -2.51
RPA1P27694 RNU6-881P-201ENST00000516813 102 ntBASIC-0.63□□□□□ -2.51
RPA1P27694 SNORD115-37-201ENST00000363768 82 ntBASIC-0.64□□□□□ -2.51
RPA1P27694 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.64□□□□□ -2.51
RPA1P27694 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.64□□□□□ -2.51
RPA1P27694 MIR517B-201ENST00000385102 67 ntBASIC-0.64□□□□□ -2.51
RPA1P27694 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
RPA1P27694 AP000533.3-201ENST00000447704 118 ntBASIC-0.64□□□□□ -2.51
RPA1P27694 MIR4484-201ENST00000582855 83 ntBASIC-0.64□□□□□ -2.51
RPA1P27694 AL445584.3-201ENST00000617173 78 ntBASIC-0.64□□□□□ -2.51
RPA1P27694 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.65□□□□□ -2.51
RPA1P27694 RNU6-758P-201ENST00000516292 89 ntBASIC-0.65□□□□□ -2.51
RPA1P27694 MIR548AI-201ENST00000579940 88 ntBASIC-0.65□□□□□ -2.51
RPA1P27694 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 SNORD114-14-201ENST00000362723 75 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 RNU6-35P-201ENST00000384530 107 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 MIR224-201ENST00000384889 81 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 RNY4P30-201ENST00000410216 95 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 RNU6-982P-201ENST00000516216 102 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 RNU6-752P-201ENST00000516376 102 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 RNU6-557P-201ENST00000516842 110 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 MIR664A-201ENST00000626086 82 ntBASIC-0.66□□□□□ -2.52
RPA1P27694 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.67□□□□□ -2.52
RPA1P27694 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.67□□□□□ -2.52
RPA1P27694 AC074348.1-201ENST00000426503 132 ntBASIC-0.67□□□□□ -2.52
RPA1P27694 MIR3681-201ENST00000580089 72 ntBASIC-0.67□□□□□ -2.52
RPA1P27694 AC108676.2-201ENST00000605225 163 ntBASIC-0.67□□□□□ -2.52
RPA1P27694 RNU4-63P-201ENST00000411313 118 ntBASIC-0.68□□□□□ -2.52
RPA1P27694 RNU6-645P-201ENST00000364649 106 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 RNU6-686P-201ENST00000364839 107 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 MT-TQ-201ENST00000387372 72 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 AC022137.1-201ENST00000483735 151 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 RNU6-518P-201ENST00000516056 96 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 MIR5588-201ENST00000581890 63 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 U2.7-201ENST00000619197 100 ntBASIC-0.69□□□□□ -2.52
RPA1P27694 RNU6-681P-201ENST00000364012 104 ntBASIC-0.7□□□□□ -2.52
RPA1P27694 RNU6-979P-201ENST00000383896 107 ntBASIC-0.7□□□□□ -2.52
RPA1P27694 SNORA8.1-201ENST00000384250 140 ntBASIC-0.7□□□□□ -2.52
RPA1P27694 RNU6-129P-201ENST00000391022 107 ntBASIC-0.7□□□□□ -2.52
RPA1P27694 Z95118.1-201ENST00000421372 247 ntBASIC-0.7□□□□□ -2.52
RPA1P27694 RNU6-303P-201ENST00000517091 106 ntBASIC-0.7□□□□□ -2.52
RPA1P27694 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.71□□□□□ -2.52
RPA1P27694 RNU6-604P-201ENST00000390917 100 ntBASIC-0.71□□□□□ -2.52
RPA1P27694 MIR1265-201ENST00000408444 86 ntBASIC-0.71□□□□□ -2.52
RPA1P27694 SNORD18.2-201ENST00000459604 70 ntBASIC-0.71□□□□□ -2.52
RPA1P27694 MIR3675-201ENST00000583661 73 ntBASIC-0.71□□□□□ -2.52
RPA1P27694 MIR494-201ENST00000349529 81 ntBASIC-0.72□□□□□ -2.52
RPA1P27694 SNORD114-25-201ENST00000363742 72 ntBASIC-0.72□□□□□ -2.52
RPA1P27694 RNY1P1-201ENST00000364372 112 ntBASIC-0.73□□□□□ -2.53
RPA1P27694 SNORD114-17-201ENST00000364699 75 ntBASIC-0.73□□□□□ -2.53
RPA1P27694 SNORD74.6-201ENST00000364796 70 ntBASIC-0.73□□□□□ -2.53
RPA1P27694 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.73□□□□□ -2.53
RPA1P27694 SNORA62.4-201ENST00000365504 151 ntBASIC-0.73□□□□□ -2.53
RPA1P27694 RNU6-431P-201ENST00000383874 107 ntBASIC-0.73□□□□□ -2.53
RPA1P27694 SCARNA18B-201ENST00000458806 135 ntBASIC-0.73□□□□□ -2.53
RPA1P27694 AL500527.2-201ENST00000454105 95 ntBASIC-0.74□□□□□ -2.53
RPA1P27694 AC021146.6-201ENST00000514659 117 ntBASIC-0.74□□□□□ -2.53
RPA1P27694 RNA5SP470-201ENST00000516463 106 ntBASIC-0.74□□□□□ -2.53
RPA1P27694 IGLL4P-201ENST00000614590 133 ntBASIC-0.74□□□□□ -2.53
RPA1P27694 SNORD45.1-201ENST00000363181 77 ntBASIC-0.75□□□□□ -2.53
RPA1P27694 SNORD95.1-201ENST00000364099 68 ntBASIC-0.75□□□□□ -2.53
RPA1P27694 RNU6-246P-201ENST00000384702 107 ntBASIC-0.75□□□□□ -2.53
RPA1P27694 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms