Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNA5SP470-201ENST00000516463 106 ntBASIC1.12□□□□□ -2.23
VARSP26640 MIR598-201ENST00000384868 97 ntBASIC1.11□□□□□ -2.23
VARSP26640 SNORD71-201ENST00000411292 86 ntBASIC1.11□□□□□ -2.23
VARSP26640 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
VARSP26640 RNU4-54P-201ENST00000516428 129 ntBASIC1.11□□□□□ -2.23
VARSP26640 MIR4677-201ENST00000584153 80 ntBASIC1.11□□□□□ -2.23
VARSP26640 AC084368.1-201ENST00000620935 65 ntBASIC1.11□□□□□ -2.23
VARSP26640 RNU6-35P-201ENST00000384530 107 ntBASIC1.1□□□□□ -2.23
VARSP26640 MIRLET7B-201ENST00000385140 83 ntBASIC1.1□□□□□ -2.23
VARSP26640 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
VARSP26640 RNU6-782P-201ENST00000516852 104 ntBASIC1.1□□□□□ -2.23
VARSP26640 MIR429-201ENST00000362106 83 ntBASIC1.09□□□□□ -2.23
VARSP26640 MIR608-201ENST00000384820 100 ntBASIC1.09□□□□□ -2.23
VARSP26640 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
VARSP26640 MIR501-201ENST00000390204 84 ntBASIC1.09□□□□□ -2.23
VARSP26640 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
VARSP26640 RNU6-502P-201ENST00000362419 108 ntBASIC1.08□□□□□ -2.24
VARSP26640 RNU6-458P-201ENST00000384179 107 ntBASIC1.08□□□□□ -2.24
VARSP26640 MIR548X-201ENST00000580069 75 ntBASIC1.08□□□□□ -2.24
VARSP26640 U6.58-201ENST00000613107 107 ntBASIC1.08□□□□□ -2.24
VARSP26640 MIR518A1-201ENST00000385068 85 ntBASIC1.07□□□□□ -2.24
VARSP26640 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
VARSP26640 MIR6755-201ENST00000619993 66 ntBASIC1.07□□□□□ -2.24
VARSP26640 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
VARSP26640 MIR760-201ENST00000390220 80 ntBASIC1.05□□□□□ -2.24
VARSP26640 MIR548J-201ENST00000408833 112 ntBASIC1.05□□□□□ -2.24
VARSP26640 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
VARSP26640 MIR6857-201ENST00000613267 93 ntBASIC1.05□□□□□ -2.24
VARSP26640 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.05□□□□□ -2.24
VARSP26640 RN7SL660P-201ENST00000614852 299 ntBASIC1.04□□□□□ -2.24
VARSP26640 RNU6-930P-201ENST00000390938 100 ntBASIC1.03□□□□□ -2.24
VARSP26640 MIR4490-201ENST00000582647 84 ntBASIC1.03□□□□□ -2.24
VARSP26640 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
VARSP26640 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.03□□□□□ -2.24
VARSP26640 AL353803.5-201ENST00000599815 141 ntBASIC1.01□□□□□ -2.25
VARSP26640 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
VARSP26640 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VARSP26640 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
VARSP26640 MIR579-201ENST00000385221 98 ntBASIC1□□□□□ -2.25
VARSP26640 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1□□□□□ -2.25
VARSP26640 RNU6-848P-201ENST00000515948 107 ntBASIC1□□□□□ -2.25
VARSP26640 RNU6-617P-201ENST00000516147 107 ntBASIC1□□□□□ -2.25
VARSP26640 RNU6-473P-201ENST00000516164 107 ntBASIC1□□□□□ -2.25
VARSP26640 RNU6-1049P-201ENST00000516414 107 ntBASIC1□□□□□ -2.25
VARSP26640 MIR5000-201ENST00000577717 103 ntBASIC1□□□□□ -2.25
VARSP26640 AL590095.2-201ENST00000604136 117 ntBASIC1□□□□□ -2.25
VARSP26640 MIR499B-201ENST00000636498 73 ntBASIC1□□□□□ -2.25
VARSP26640 AC098934.3-201ENST00000430450 190 ntBASIC0.99□□□□□ -2.25
VARSP26640 PSMC1P5-201ENST00000512850 177 ntBASIC0.99□□□□□ -2.25
VARSP26640 RNU7-129P-201ENST00000516128 62 ntBASIC0.99□□□□□ -2.25
VARSP26640 MIR3925-201ENST00000584674 77 ntBASIC0.99□□□□□ -2.25
VARSP26640 RNA5SP128-201ENST00000365305 116 ntBASIC0.98□□□□□ -2.25
VARSP26640 RNU6-110P-201ENST00000384508 104 ntBASIC0.98□□□□□ -2.25
VARSP26640 AP000676.1-201ENST00000533307 52 ntBASIC0.98□□□□□ -2.25
VARSP26640 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VARSP26640 RNU6-598P-201ENST00000364017 105 ntBASIC0.97□□□□□ -2.25
VARSP26640 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
VARSP26640 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.97□□□□□ -2.25
VARSP26640 MIR6779-201ENST00000617283 64 ntBASIC0.97□□□□□ -2.25
VARSP26640 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
VARSP26640 U2.18-201ENST00000622185 84 ntBASIC0.96□□□□□ -2.26
VARSP26640 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
VARSP26640 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
VARSP26640 RNU6-419P-201ENST00000517030 63 ntBASIC0.95□□□□□ -2.26
VARSP26640 MIR876-201ENST00000401147 81 ntBASIC0.94□□□□□ -2.26
VARSP26640 RNU7-151P-201ENST00000516930 53 ntBASIC0.94□□□□□ -2.26
VARSP26640 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
VARSP26640 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
VARSP26640 MIR548F3-201ENST00000408509 87 ntBASIC0.93□□□□□ -2.26
VARSP26640 SCARNA11.2-201ENST00000517183 154 ntBASIC0.93□□□□□ -2.26
VARSP26640 snoR1.1-201ENST00000628177 80 ntBASIC0.93□□□□□ -2.26
VARSP26640 SNORD115-23-201ENST00000364461 82 ntBASIC0.92□□□□□ -2.26
VARSP26640 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
VARSP26640 MIR4432-201ENST00000581823 84 ntBASIC0.92□□□□□ -2.26
VARSP26640 RN7SL793P-201ENST00000583259 296 ntBASIC0.92□□□□□ -2.26
VARSP26640 AC108676.2-201ENST00000605225 163 ntBASIC0.91□□□□□ -2.26
VARSP26640 MIR216A-201ENST00000385063 110 ntBASIC0.9□□□□□ -2.27
VARSP26640 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
VARSP26640 RNU7-160P-201ENST00000516660 62 ntBASIC0.89□□□□□ -2.27
VARSP26640 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VARSP26640 RNU6-838P-201ENST00000363399 108 ntBASIC0.88□□□□□ -2.27
VARSP26640 MIR106A-201ENST00000384870 81 ntBASIC0.88□□□□□ -2.27
VARSP26640 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
VARSP26640 RNU6-1262P-201ENST00000516217 96 ntBASIC0.88□□□□□ -2.27
VARSP26640 RNU6-1206P-201ENST00000516339 103 ntBASIC0.88□□□□□ -2.27
VARSP26640 Y_RNA.69-201ENST00000362885 109 ntBASIC0.87□□□□□ -2.27
VARSP26640 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
VARSP26640 RNU6-924P-201ENST00000362926 108 ntBASIC0.86□□□□□ -2.27
VARSP26640 SNORD44.1-201ENST00000363202 61 ntBASIC0.86□□□□□ -2.27
VARSP26640 RNA5SP325-201ENST00000363756 130 ntBASIC0.86□□□□□ -2.27
VARSP26640 RNU6-995P-201ENST00000391244 107 ntBASIC0.86□□□□□ -2.27
VARSP26640 RNU6-863P-201ENST00000515989 104 ntBASIC0.86□□□□□ -2.27
VARSP26640 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
VARSP26640 MIR548AA1-201ENST00000384971 97 ntBASIC0.85□□□□□ -2.27
VARSP26640 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.85□□□□□ -2.27
VARSP26640 Y_RNA.698-201ENST00000516798 118 ntBASIC0.85□□□□□ -2.27
VARSP26640 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
VARSP26640 RNA5SP98-201ENST00000363158 137 ntBASIC0.84□□□□□ -2.27
VARSP26640 RNU6-696P-201ENST00000390834 107 ntBASIC0.84□□□□□ -2.27
VARSP26640 uc_338.36-201ENST00000622331 158 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms