Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNA5SP470-201ENST00000516463 106 ntBASIC1.12□□□□□ -2.23
VARSP26640 MIR598-201ENST00000384868 97 ntBASIC1.11□□□□□ -2.23
VARSP26640 SNORD71-201ENST00000411292 86 ntBASIC1.11□□□□□ -2.23
VARSP26640 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
VARSP26640 RNU4-54P-201ENST00000516428 129 ntBASIC1.11□□□□□ -2.23
VARSP26640 MIR4677-201ENST00000584153 80 ntBASIC1.11□□□□□ -2.23
VARSP26640 AC084368.1-201ENST00000620935 65 ntBASIC1.11□□□□□ -2.23
VARSP26640 RNU6-35P-201ENST00000384530 107 ntBASIC1.1□□□□□ -2.23
VARSP26640 MIRLET7B-201ENST00000385140 83 ntBASIC1.1□□□□□ -2.23
VARSP26640 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
VARSP26640 RNU6-782P-201ENST00000516852 104 ntBASIC1.1□□□□□ -2.23
VARSP26640 MIR429-201ENST00000362106 83 ntBASIC1.09□□□□□ -2.23
VARSP26640 MIR608-201ENST00000384820 100 ntBASIC1.09□□□□□ -2.23
VARSP26640 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
VARSP26640 MIR501-201ENST00000390204 84 ntBASIC1.09□□□□□ -2.23
VARSP26640 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
VARSP26640 RNU6-502P-201ENST00000362419 108 ntBASIC1.08□□□□□ -2.24
VARSP26640 RNU6-458P-201ENST00000384179 107 ntBASIC1.08□□□□□ -2.24
VARSP26640 MIR548X-201ENST00000580069 75 ntBASIC1.08□□□□□ -2.24
VARSP26640 U6.58-201ENST00000613107 107 ntBASIC1.08□□□□□ -2.24
VARSP26640 MIR518A1-201ENST00000385068 85 ntBASIC1.07□□□□□ -2.24
VARSP26640 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
VARSP26640 MIR6755-201ENST00000619993 66 ntBASIC1.07□□□□□ -2.24
VARSP26640 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
VARSP26640 MIR760-201ENST00000390220 80 ntBASIC1.05□□□□□ -2.24
VARSP26640 MIR548J-201ENST00000408833 112 ntBASIC1.05□□□□□ -2.24
VARSP26640 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
VARSP26640 MIR6857-201ENST00000613267 93 ntBASIC1.05□□□□□ -2.24
VARSP26640 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.05□□□□□ -2.24
VARSP26640 RN7SL660P-201ENST00000614852 299 ntBASIC1.04□□□□□ -2.24
VARSP26640 RNU6-930P-201ENST00000390938 100 ntBASIC1.03□□□□□ -2.24
VARSP26640 MIR4490-201ENST00000582647 84 ntBASIC1.03□□□□□ -2.24
VARSP26640 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
VARSP26640 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.03□□□□□ -2.24
VARSP26640 AL353803.5-201ENST00000599815 141 ntBASIC1.01□□□□□ -2.25
VARSP26640 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
VARSP26640 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VARSP26640 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
VARSP26640 MIR579-201ENST00000385221 98 ntBASIC1□□□□□ -2.25
VARSP26640 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1□□□□□ -2.25
VARSP26640 RNU6-848P-201ENST00000515948 107 ntBASIC1□□□□□ -2.25
VARSP26640 RNU6-617P-201ENST00000516147 107 ntBASIC1□□□□□ -2.25
VARSP26640 RNU6-473P-201ENST00000516164 107 ntBASIC1□□□□□ -2.25
VARSP26640 RNU6-1049P-201ENST00000516414 107 ntBASIC1□□□□□ -2.25
VARSP26640 MIR5000-201ENST00000577717 103 ntBASIC1□□□□□ -2.25
VARSP26640 AL590095.2-201ENST00000604136 117 ntBASIC1□□□□□ -2.25
VARSP26640 MIR499B-201ENST00000636498 73 ntBASIC1□□□□□ -2.25
VARSP26640 AC098934.3-201ENST00000430450 190 ntBASIC0.99□□□□□ -2.25
VARSP26640 PSMC1P5-201ENST00000512850 177 ntBASIC0.99□□□□□ -2.25
VARSP26640 RNU7-129P-201ENST00000516128 62 ntBASIC0.99□□□□□ -2.25
VARSP26640 MIR3925-201ENST00000584674 77 ntBASIC0.99□□□□□ -2.25
VARSP26640 RNA5SP128-201ENST00000365305 116 ntBASIC0.98□□□□□ -2.25
VARSP26640 RNU6-110P-201ENST00000384508 104 ntBASIC0.98□□□□□ -2.25
VARSP26640 AP000676.1-201ENST00000533307 52 ntBASIC0.98□□□□□ -2.25
VARSP26640 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VARSP26640 RNU6-598P-201ENST00000364017 105 ntBASIC0.97□□□□□ -2.25
VARSP26640 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
VARSP26640 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.97□□□□□ -2.25
VARSP26640 MIR6779-201ENST00000617283 64 ntBASIC0.97□□□□□ -2.25
VARSP26640 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
VARSP26640 U2.18-201ENST00000622185 84 ntBASIC0.96□□□□□ -2.26
VARSP26640 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
VARSP26640 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
VARSP26640 RNU6-419P-201ENST00000517030 63 ntBASIC0.95□□□□□ -2.26
VARSP26640 MIR876-201ENST00000401147 81 ntBASIC0.94□□□□□ -2.26
VARSP26640 RNU7-151P-201ENST00000516930 53 ntBASIC0.94□□□□□ -2.26
VARSP26640 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
VARSP26640 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
VARSP26640 MIR548F3-201ENST00000408509 87 ntBASIC0.93□□□□□ -2.26
VARSP26640 SCARNA11.2-201ENST00000517183 154 ntBASIC0.93□□□□□ -2.26
VARSP26640 snoR1.1-201ENST00000628177 80 ntBASIC0.93□□□□□ -2.26
VARSP26640 SNORD115-23-201ENST00000364461 82 ntBASIC0.92□□□□□ -2.26
VARSP26640 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
VARSP26640 MIR4432-201ENST00000581823 84 ntBASIC0.92□□□□□ -2.26
VARSP26640 RN7SL793P-201ENST00000583259 296 ntBASIC0.92□□□□□ -2.26
VARSP26640 AC108676.2-201ENST00000605225 163 ntBASIC0.91□□□□□ -2.26
VARSP26640 MIR216A-201ENST00000385063 110 ntBASIC0.9□□□□□ -2.27
VARSP26640 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
VARSP26640 RNU7-160P-201ENST00000516660 62 ntBASIC0.89□□□□□ -2.27
VARSP26640 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VARSP26640 RNU6-838P-201ENST00000363399 108 ntBASIC0.88□□□□□ -2.27
VARSP26640 MIR106A-201ENST00000384870 81 ntBASIC0.88□□□□□ -2.27
VARSP26640 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
VARSP26640 RNU6-1262P-201ENST00000516217 96 ntBASIC0.88□□□□□ -2.27
VARSP26640 RNU6-1206P-201ENST00000516339 103 ntBASIC0.88□□□□□ -2.27
VARSP26640 Y_RNA.69-201ENST00000362885 109 ntBASIC0.87□□□□□ -2.27
VARSP26640 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
VARSP26640 RNU6-924P-201ENST00000362926 108 ntBASIC0.86□□□□□ -2.27
VARSP26640 SNORD44.1-201ENST00000363202 61 ntBASIC0.86□□□□□ -2.27
VARSP26640 RNA5SP325-201ENST00000363756 130 ntBASIC0.86□□□□□ -2.27
VARSP26640 RNU6-995P-201ENST00000391244 107 ntBASIC0.86□□□□□ -2.27
VARSP26640 RNU6-863P-201ENST00000515989 104 ntBASIC0.86□□□□□ -2.27
VARSP26640 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
VARSP26640 MIR548AA1-201ENST00000384971 97 ntBASIC0.85□□□□□ -2.27
VARSP26640 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.85□□□□□ -2.27
VARSP26640 Y_RNA.698-201ENST00000516798 118 ntBASIC0.85□□□□□ -2.27
VARSP26640 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
VARSP26640 RNA5SP98-201ENST00000363158 137 ntBASIC0.84□□□□□ -2.27
VARSP26640 RNU6-696P-201ENST00000390834 107 ntBASIC0.84□□□□□ -2.27
VARSP26640 uc_338.36-201ENST00000622331 158 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 279.1 ms