Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
PTX3P26022 U6.96-201ENST00000636425 70 ntBASIC0.05□□□□□ -2.4
PTX3P26022 SNORD115-22-201ENST00000364456 82 ntBASIC0.04□□□□□ -2.4
PTX3P26022 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
PTX3P26022 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.04□□□□□ -2.4
PTX3P26022 RNU6-687P-201ENST00000516443 89 ntBASIC0.03□□□□□ -2.4
PTX3P26022 Y_RNA.205-201ENST00000364128 113 ntBASIC0.02□□□□□ -2.41
PTX3P26022 RNU6-645P-201ENST00000364649 106 ntBASIC0.02□□□□□ -2.41
PTX3P26022 RNU6-46P-201ENST00000383860 107 ntBASIC0.02□□□□□ -2.41
PTX3P26022 Y_RNA.545-201ENST00000384652 105 ntBASIC0.02□□□□□ -2.41
PTX3P26022 AP000676.1-201ENST00000533307 52 ntBASIC0.02□□□□□ -2.41
PTX3P26022 MIR6773-201ENST00000612812 74 ntBASIC0.02□□□□□ -2.41
PTX3P26022 RNU6-502P-201ENST00000362419 108 ntBASIC0.01□□□□□ -2.41
PTX3P26022 RNU6-776P-201ENST00000364403 104 ntBASIC0.01□□□□□ -2.41
PTX3P26022 SNORA33.1-201ENST00000364957 130 ntBASIC0.01□□□□□ -2.41
PTX3P26022 RNU6-1022P-201ENST00000365049 104 ntBASIC0.01□□□□□ -2.41
PTX3P26022 RNU6-656P-201ENST00000516785 107 ntBASIC0.01□□□□□ -2.41
PTX3P26022 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.01□□□□□ -2.41
PTX3P26022 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
PTX3P26022 MTND4LP1-201ENST00000446263 157 ntBASIC0□□□□□ -2.41
PTX3P26022 MIR6507-201ENST00000613630 70 ntBASIC0□□□□□ -2.41
PTX3P26022 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
PTX3P26022 MIR1295B-201ENST00000636144 60 ntBASIC0□□□□□ -2.41
PTX3P26022 SNORD113.1-201ENST00000363280 73 ntBASIC-0.01□□□□□ -2.41
PTX3P26022 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.01□□□□□ -2.41
PTX3P26022 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
PTX3P26022 RNA5SP457-201ENST00000363657 124 ntBASIC-0.03□□□□□ -2.41
PTX3P26022 RNU6-929P-201ENST00000384429 107 ntBASIC-0.03□□□□□ -2.41
PTX3P26022 SNORD45A-201ENST00000384512 84 ntBASIC-0.03□□□□□ -2.41
PTX3P26022 RNU6-337P-201ENST00000391243 106 ntBASIC-0.03□□□□□ -2.41
PTX3P26022 MIR1197-201ENST00000408818 88 ntBASIC-0.03□□□□□ -2.41
PTX3P26022 RNU6-871P-201ENST00000516122 100 ntBASIC-0.03□□□□□ -2.41
PTX3P26022 RNU6-881P-201ENST00000516813 102 ntBASIC-0.03□□□□□ -2.41
PTX3P26022 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.04□□□□□ -2.42
PTX3P26022 RNU6-895P-201ENST00000384125 103 ntBASIC-0.04□□□□□ -2.42
PTX3P26022 RNU6-900P-201ENST00000384498 102 ntBASIC-0.04□□□□□ -2.42
PTX3P26022 MIRLET7B-201ENST00000385140 83 ntBASIC-0.04□□□□□ -2.42
PTX3P26022 RNU6-982P-201ENST00000516216 102 ntBASIC-0.04□□□□□ -2.42
PTX3P26022 RNU6-634P-201ENST00000459134 106 ntBASIC-0.05□□□□□ -2.42
PTX3P26022 RNU6-523P-201ENST00000516304 54 ntBASIC-0.05□□□□□ -2.42
PTX3P26022 RNA5SP330-201ENST00000517096 96 ntBASIC-0.05□□□□□ -2.42
PTX3P26022 CYP3A54P-201ENST00000566950 75 ntBASIC-0.05□□□□□ -2.42
PTX3P26022 MIR6779-201ENST00000617283 64 ntBASIC-0.05□□□□□ -2.42
PTX3P26022 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.06□□□□□ -2.42
PTX3P26022 RNU6-455P-201ENST00000384681 107 ntBASIC-0.06□□□□□ -2.42
PTX3P26022 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
PTX3P26022 MIR889-201ENST00000401280 79 ntBASIC-0.06□□□□□ -2.42
PTX3P26022 RNU7-55P-201ENST00000459426 62 ntBASIC-0.06□□□□□ -2.42
PTX3P26022 RNU6-302P-201ENST00000365249 107 ntBASIC-0.07□□□□□ -2.42
PTX3P26022 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.07□□□□□ -2.42
PTX3P26022 RNA5SP470-201ENST00000516463 106 ntBASIC-0.07□□□□□ -2.42
PTX3P26022 RNU6-668P-201ENST00000364180 107 ntBASIC-0.08□□□□□ -2.42
PTX3P26022 SNORD115-31-201ENST00000365318 82 ntBASIC-0.08□□□□□ -2.42
PTX3P26022 MIR9-2-201ENST00000384838 87 ntBASIC-0.08□□□□□ -2.42
PTX3P26022 AC244250.2-201ENST00000418731 148 ntBASIC-0.08□□□□□ -2.42
PTX3P26022 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.08□□□□□ -2.42
PTX3P26022 AL109933.3-201ENST00000619095 188 ntBASIC-0.08□□□□□ -2.42
PTX3P26022 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.09□□□□□ -2.42
PTX3P26022 AC090617.8-201ENST00000623339 167 ntBASIC-0.09□□□□□ -2.42
PTX3P26022 SNORA18.1-201ENST00000363418 128 ntBASIC-0.1□□□□□ -2.43
PTX3P26022 SNORD49B-201ENST00000365172 72 ntBASIC-0.1□□□□□ -2.43
PTX3P26022 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.1□□□□□ -2.43
PTX3P26022 MIR5190-201ENST00000581537 80 ntBASIC-0.1□□□□□ -2.43
PTX3P26022 MIR1255B2-201ENST00000408618 67 ntBASIC-0.11□□□□□ -2.43
PTX3P26022 MIR655-201ENST00000362159 97 ntBASIC-0.12□□□□□ -2.43
PTX3P26022 RNA5SP215-201ENST00000363440 122 ntBASIC-0.12□□□□□ -2.43
PTX3P26022 RNU6-973P-201ENST00000364690 107 ntBASIC-0.12□□□□□ -2.43
PTX3P26022 AL021921.1-201ENST00000442774 93 ntBASIC-0.12□□□□□ -2.43
PTX3P26022 U2.7-201ENST00000619197 100 ntBASIC-0.12□□□□□ -2.43
PTX3P26022 snoR1.1-201ENST00000628177 80 ntBASIC-0.12□□□□□ -2.43
PTX3P26022 SNORD115-23-201ENST00000364461 82 ntBASIC-0.13□□□□□ -2.43
PTX3P26022 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.13□□□□□ -2.43
PTX3P26022 RNU6-540P-201ENST00000384622 101 ntBASIC-0.14□□□□□ -2.43
PTX3P26022 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.14□□□□□ -2.43
PTX3P26022 MIR4263-201ENST00000584745 83 ntBASIC-0.14□□□□□ -2.43
PTX3P26022 AL391099.1-201ENST00000624635 187 ntBASIC-0.14□□□□□ -2.43
PTX3P26022 SNORD116-24-201ENST00000384549 92 ntBASIC-0.15□□□□□ -2.43
PTX3P26022 MIR4432-201ENST00000581823 84 ntBASIC-0.15□□□□□ -2.43
PTX3P26022 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.15□□□□□ -2.43
PTX3P26022 RNA5SP257-201ENST00000363023 116 ntBASIC-0.16□□□□□ -2.44
PTX3P26022 MIR548C-201ENST00000384815 97 ntBASIC-0.16□□□□□ -2.44
PTX3P26022 RNU6-663P-201ENST00000391105 106 ntBASIC-0.16□□□□□ -2.44
PTX3P26022 RNU7-154P-201ENST00000516194 62 ntBASIC-0.16□□□□□ -2.44
PTX3P26022 SNORD114-12-201ENST00000365400 75 ntBASIC-0.17□□□□□ -2.44
PTX3P26022 AC096531.1-201ENST00000419107 107 ntBASIC-0.17□□□□□ -2.44
PTX3P26022 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
PTX3P26022 MIR329-2-201ENST00000385029 84 ntBASIC-0.18□□□□□ -2.44
PTX3P26022 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
PTX3P26022 RNU6-518P-201ENST00000516056 96 ntBASIC-0.18□□□□□ -2.44
PTX3P26022 MIR3666-201ENST00000607845 111 ntBASIC-0.18□□□□□ -2.44
PTX3P26022 RNU6-901P-201ENST00000384593 106 ntBASIC-0.19□□□□□ -2.44
PTX3P26022 MIR519A2-201ENST00000384990 87 ntBASIC-0.2□□□□□ -2.44
PTX3P26022 MIR517B-201ENST00000385102 67 ntBASIC-0.2□□□□□ -2.44
PTX3P26022 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.2□□□□□ -2.44
PTX3P26022 RNU7-174P-201ENST00000516248 59 ntBASIC-0.2□□□□□ -2.44
PTX3P26022 RNA5SP285-201ENST00000516619 119 ntBASIC-0.2□□□□□ -2.44
PTX3P26022 SNORA62.4-201ENST00000365504 151 ntBASIC-0.21□□□□□ -2.44
PTX3P26022 RNU6-649P-201ENST00000384463 107 ntBASIC-0.21□□□□□ -2.44
PTX3P26022 SNORD30.1-201ENST00000391309 70 ntBASIC-0.21□□□□□ -2.44
PTX3P26022 RNU6-539P-201ENST00000516665 103 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms