Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR548D2-201ENST00000384955 97 ntBASIC-5.37□□□□□ -3.27
VCANP13611 MIR616-201ENST00000385293 97 ntBASIC-5.37□□□□□ -3.27
VCANP13611 Y_RNA.418-201ENST00000384029 102 ntBASIC-5.37□□□□□ -3.27
VCANP13611 RNU6-95P-201ENST00000384697 107 ntBASIC-5.37□□□□□ -3.27
VCANP13611 MTND1P1-201ENST00000445453 368 ntBASIC-5.37□□□□□ -3.27
VCANP13611 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.38□□□□□ -3.27
VCANP13611 RNU6-895P-201ENST00000384125 103 ntBASIC-5.38□□□□□ -3.27
VCANP13611 Y_RNA.309-201ENST00000365046 111 ntBASIC-5.38□□□□□ -3.27
VCANP13611 SNORD116-1-201ENST00000384335 95 ntBASIC-5.38□□□□□ -3.27
VCANP13611 AC005899.2-201ENST00000584353 90 ntBASIC-5.39□□□□□ -3.27
VCANP13611 Y_RNA.651-201ENST00000459380 103 ntBASIC-5.4□□□□□ -3.27
VCANP13611 RNU6-533P-201ENST00000384144 107 ntBASIC-5.41□□□□□ -3.27
VCANP13611 Y_RNA.378-201ENST00000365652 113 ntBASIC-5.41□□□□□ -3.28
VCANP13611 AC015540.1-201ENST00000615828 501 ntBASIC-5.41□□□□□ -3.28
VCANP13611 RNU6-70P-201ENST00000516438 60 ntBASIC-5.41□□□□□ -3.28
VCANP13611 SNORD18B-201ENST00000365659 72 ntBASIC-5.42□□□□□ -3.28
VCANP13611 MIR2053-201ENST00000459295 91 ntBASIC-5.42□□□□□ -3.28
VCANP13611 AC016252.1-201ENST00000609721 474 ntBASIC-5.42□□□□□ -3.28
VCANP13611 RNU6-639P-201ENST00000384074 107 ntBASIC-5.43□□□□□ -3.28
VCANP13611 Vault.3-201ENST00000516676 95 ntBASIC-5.43□□□□□ -3.28
VCANP13611 RNU6-699P-201ENST00000517081 110 ntBASIC-5.43□□□□□ -3.28
VCANP13611 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-5.43□□□□□ -3.28
VCANP13611 MIR4424-201ENST00000585257 86 ntBASIC-5.44□□□□□ -3.28
VCANP13611 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.44□□□□□ -3.28
VCANP13611 AL121914.1-201ENST00000450188 156 ntBASIC-5.44□□□□□ -3.28
VCANP13611 RNU6-911P-201ENST00000516523 104 ntBASIC-5.45□□□□□ -3.28
VCANP13611 RNU5B-4P-201ENST00000363508 111 ntBASIC-5.46□□□□□ -3.28
VCANP13611 RNU6-842P-201ENST00000384269 107 ntBASIC-5.46□□□□□ -3.28
VCANP13611 Y_RNA.608-201ENST00000410647 95 ntBASIC-5.46□□□□□ -3.28
VCANP13611 MIR5701-3-201ENST00000578890 82 ntBASIC-5.46□□□□□ -3.28
VCANP13611 MIR5701-1-201ENST00000585138 82 ntBASIC-5.46□□□□□ -3.28
VCANP13611 MIR5701-2-201ENST00000615634 82 ntBASIC-5.46□□□□□ -3.28
VCANP13611 RNU6-838P-201ENST00000363399 108 ntBASIC-5.46□□□□□ -3.28
VCANP13611 RNU6-290P-201ENST00000365212 101 ntBASIC-5.46□□□□□ -3.28
VCANP13611 RNU6-634P-201ENST00000459134 106 ntBASIC-5.48□□□□□ -3.29
VCANP13611 Y_RNA.96-201ENST00000363092 109 ntBASIC-5.48□□□□□ -3.29
VCANP13611 RNY3P2-201ENST00000362918 102 ntBASIC-5.49□□□□□ -3.29
VCANP13611 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-5.49□□□□□ -3.29
VCANP13611 Y_RNA.29-201ENST00000362570 113 ntBASIC-5.49□□□□□ -3.29
VCANP13611 RNU6-485P-201ENST00000363475 107 ntBASIC-5.5□□□□□ -3.29
VCANP13611 MIR4484-201ENST00000582855 83 ntBASIC-5.5□□□□□ -3.29
VCANP13611 RNU6-806P-201ENST00000365147 105 ntBASIC-5.51□□□□□ -3.29
VCANP13611 SNORD111B-201ENST00000408587 80 ntBASIC-5.51□□□□□ -3.29
VCANP13611 Y_RNA.581-201ENST00000391017 97 ntBASIC-5.51□□□□□ -3.29
VCANP13611 RNU6-381P-201ENST00000391259 108 ntBASIC-5.51□□□□□ -3.29
VCANP13611 SEPT14P3-201ENST00000439401 183 ntBASIC-5.51□□□□□ -3.29
VCANP13611 AL732372.2-207ENST00000445840 183 ntBASIC-5.51□□□□□ -3.29
VCANP13611 SEPT14P2-201ENST00000453405 183 ntBASIC-5.51□□□□□ -3.29
VCANP13611 FO082796.1-201ENST00000523795 183 ntBASIC-5.51□□□□□ -3.29
VCANP13611 AL021368.1-201ENST00000607490 540 ntBASIC-5.52□□□□□ -3.29
VCANP13611 Y_RNA.183-201ENST00000363882 113 ntBASIC-5.53□□□□□ -3.29
VCANP13611 RNU6-578P-201ENST00000390980 103 ntBASIC-5.53□□□□□ -3.29
VCANP13611 RNU6-1050P-201ENST00000410388 107 ntBASIC-5.53□□□□□ -3.29
VCANP13611 AC016911.1-201ENST00000613297 452 ntBASIC-5.54□□□□□ -3.3
VCANP13611 SNORD113-5-201ENST00000607261 78 ntBASIC-5.54□□□□□ -3.3
VCANP13611 RNU6-887P-201ENST00000410660 100 ntBASIC-5.55□□□□□ -3.3
VCANP13611 RNU6-255P-201ENST00000516957 105 ntBASIC-5.56□□□□□ -3.3
VCANP13611 snoU18.1-201ENST00000629629 71 ntBASIC-5.56□□□□□ -3.3
VCANP13611 RNU6-659P-201ENST00000516454 104 ntBASIC-5.57□□□□□ -3.3
VCANP13611 MIR376A1-201ENST00000616574 68 ntBASIC-5.58□□□□□ -3.3
VCANP13611 Y_RNA.359-201ENST00000365498 102 ntBASIC-5.58□□□□□ -3.3
VCANP13611 RNU6-211P-201ENST00000384047 107 ntBASIC-5.59□□□□□ -3.3
VCANP13611 SNORD5.1-201ENST00000458800 75 ntBASIC-5.59□□□□□ -3.3
VCANP13611 Y_RNA.97-201ENST00000363094 102 ntBASIC-5.59□□□□□ -3.3
VCANP13611 MIR4744-201ENST00000581563 82 ntBASIC-5.59□□□□□ -3.3
VCANP13611 AC080013.6-201ENST00000606185 215 ntBASIC-5.59□□□□□ -3.3
VCANP13611 Y_RNA.219-201ENST00000364232 113 ntBASIC-5.59□□□□□ -3.31
VCANP13611 MIR1321-201ENST00000637766 79 ntBASIC-5.59□□□□□ -3.31
VCANP13611 RNU6-236P-201ENST00000363886 106 ntBASIC-5.6□□□□□ -3.31
VCANP13611 RNU6-81P-201ENST00000365608 104 ntBASIC-5.6□□□□□ -3.31
VCANP13611 AL356010.1-201ENST00000456364 102 ntBASIC-5.6□□□□□ -3.31
VCANP13611 RNU6-1211P-201ENST00000459179 105 ntBASIC-5.6□□□□□ -3.31
VCANP13611 RNU5E-3P-201ENST00000515913 68 ntBASIC-5.6□□□□□ -3.31
VCANP13611 RNU6-380P-201ENST00000410207 107 ntBASIC-5.61□□□□□ -3.31
VCANP13611 AC099654.13-201ENST00000639774 207 ntBASIC-5.61□□□□□ -3.31
VCANP13611 snoU2_19.4-201ENST00000364329 80 ntBASIC-5.61□□□□□ -3.31
VCANP13611 SNORD37.1-201ENST00000390968 65 ntBASIC-5.61□□□□□ -3.31
VCANP13611 RNU6-1107P-201ENST00000364817 104 ntBASIC-5.61□□□□□ -3.31
VCANP13611 RNU6-306P-201ENST00000384617 107 ntBASIC-5.61□□□□□ -3.31
VCANP13611 AC009161.1-201ENST00000417306 376 ntBASIC-5.61□□□□□ -3.31
VCANP13611 AC083904.1-201ENST00000487828 231 ntBASIC-5.61□□□□□ -3.31
VCANP13611 RNU6-795P-201ENST00000516323 103 ntBASIC-5.61□□□□□ -3.31
VCANP13611 RNU6-1314P-201ENST00000517139 104 ntBASIC-5.61□□□□□ -3.31
VCANP13611 RNU6-89P-201ENST00000606519 100 ntBASIC-5.61□□□□□ -3.31
VCANP13611 MIR8062-201ENST00000621515 85 ntBASIC-5.62□□□□□ -3.31
VCANP13611 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-5.63□□□□□ -3.31
VCANP13611 MIR1302-6-201ENST00000408466 90 ntBASIC-5.63□□□□□ -3.31
VCANP13611 MIR5009-201ENST00000578736 100 ntBASIC-5.63□□□□□ -3.31
VCANP13611 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-5.64□□□□□ -3.31
VCANP13611 MIR4668-201ENST00000582284 70 ntBASIC-5.66□□□□□ -3.31
VCANP13611 RNU6-451P-201ENST00000362921 107 ntBASIC-5.66□□□□□ -3.32
VCANP13611 AP000240.1-201ENST00000609910 452 ntBASIC-5.66□□□□□ -3.32
VCANP13611 MIR1263-201ENST00000408324 86 ntBASIC-5.66□□□□□ -3.32
VCANP13611 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-5.66□□□□□ -3.32
VCANP13611 RNU6-1042P-201ENST00000384204 107 ntBASIC-5.67□□□□□ -3.32
VCANP13611 Y_RNA.592-201ENST00000410274 109 ntBASIC-5.67□□□□□ -3.32
VCANP13611 MTND4LP30-201ENST00000454092 297 ntBASIC-5.67□□□□□ -3.32
VCANP13611 AL589823.1-201ENST00000429577 183 ntBASIC-5.68□□□□□ -3.32
VCANP13611 RNU6-1102P-201ENST00000516149 96 ntBASIC-5.68□□□□□ -3.32
VCANP13611 MIR3672-201ENST00000584290 82 ntBASIC-5.68□□□□□ -3.32
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms