Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 SNORA19-201ENST00000384737 128 ntBASIC-1.13□□□□□ -2.59
VIMP08670 MT-TR-201ENST00000387439 65 ntBASIC-1.13□□□□□ -2.59
VIMP08670 MIR1236-201ENST00000408340 102 ntBASIC-1.13□□□□□ -2.59
VIMP08670 MIR1255B2-201ENST00000408618 67 ntBASIC-1.13□□□□□ -2.59
VIMP08670 U7.3-201ENST00000616123 62 ntBASIC-1.13□□□□□ -2.59
VIMP08670 AL445584.3-201ENST00000617173 78 ntBASIC-1.13□□□□□ -2.59
VIMP08670 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.13□□□□□ -2.59
VIMP08670 MIR6888-201ENST00000621977 67 ntBASIC-1.13□□□□□ -2.59
VIMP08670 RNU6-924P-201ENST00000362926 108 ntBASIC-1.14□□□□□ -2.59
VIMP08670 RNA5SP266-201ENST00000410273 108 ntBASIC-1.14□□□□□ -2.59
VIMP08670 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.14□□□□□ -2.59
VIMP08670 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.15□□□□□ -2.59
VIMP08670 RNU6-226P-201ENST00000363778 107 ntBASIC-1.15□□□□□ -2.59
VIMP08670 AL691482.2-201ENST00000457453 84 ntBASIC-1.15□□□□□ -2.59
VIMP08670 RNA5SP180-201ENST00000516181 101 ntBASIC-1.15□□□□□ -2.59
VIMP08670 MIR3657-201ENST00000584818 117 ntBASIC-1.15□□□□□ -2.59
VIMP08670 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.15□□□□□ -2.59
VIMP08670 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.16□□□□□ -2.6
VIMP08670 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.16□□□□□ -2.6
VIMP08670 MIR5591-201ENST00000578248 65 ntBASIC-1.16□□□□□ -2.6
VIMP08670 U6.81-201ENST00000612550 106 ntBASIC-1.16□□□□□ -2.6
VIMP08670 AC132825.6-201ENST00000638861 357 ntBASIC-1.16□□□□□ -2.6
VIMP08670 SNORA2.1-201ENST00000363089 137 ntBASIC-1.17□□□□□ -2.6
VIMP08670 MIR8485-201ENST00000401372 91 ntBASIC-1.17□□□□□ -2.6
VIMP08670 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.18□□□□□ -2.6
VIMP08670 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.18□□□□□ -2.6
VIMP08670 RNU7-153P-201ENST00000516455 62 ntBASIC-1.18□□□□□ -2.6
VIMP08670 MIR1246-201ENST00000636535 73 ntBASIC-1.18□□□□□ -2.6
VIMP08670 SNORD115-33-201ENST00000363723 82 ntBASIC-1.19□□□□□ -2.6
VIMP08670 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.19□□□□□ -2.6
VIMP08670 SNORA26.4-201ENST00000391188 123 ntBASIC-1.19□□□□□ -2.6
VIMP08670 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.19□□□□□ -2.6
VIMP08670 MIR1285-2-201ENST00000408311 88 ntBASIC-1.19□□□□□ -2.6
VIMP08670 RNU6-479P-201ENST00000516348 105 ntBASIC-1.19□□□□□ -2.6
VIMP08670 CYP3A54P-201ENST00000566950 75 ntBASIC-1.19□□□□□ -2.6
VIMP08670 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.19□□□□□ -2.6
VIMP08670 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.2□□□□□ -2.6
VIMP08670 RNU6-589P-201ENST00000516485 107 ntBASIC-1.2□□□□□ -2.6
VIMP08670 MIR29B1-201ENST00000385015 81 ntBASIC-1.21□□□□□ -2.6
VIMP08670 RNU6-576P-201ENST00000390854 102 ntBASIC-1.21□□□□□ -2.6
VIMP08670 RNU4-61P-201ENST00000411243 107 ntBASIC-1.21□□□□□ -2.6
VIMP08670 SNX3P1X-201ENST00000414887 175 ntBASIC-1.21□□□□□ -2.6
VIMP08670 RNA5SP476-201ENST00000516613 103 ntBASIC-1.21□□□□□ -2.6
VIMP08670 MIR4770-201ENST00000579149 58 ntBASIC-1.21□□□□□ -2.6
VIMP08670 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.21□□□□□ -2.6
VIMP08670 RNU6-766P-201ENST00000362478 107 ntBASIC-1.22□□□□□ -2.6
VIMP08670 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.22□□□□□ -2.6
VIMP08670 MIR548M-201ENST00000408260 86 ntBASIC-1.22□□□□□ -2.6
VIMP08670 RNU7-134P-201ENST00000458997 64 ntBASIC-1.22□□□□□ -2.6
VIMP08670 HAR1A.1-201ENST00000459583 118 ntBASIC-1.22□□□□□ -2.6
VIMP08670 SNORD63.1-201ENST00000516178 80 ntBASIC-1.22□□□□□ -2.6
VIMP08670 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.22□□□□□ -2.6
VIMP08670 RNU6-158P-201ENST00000517104 100 ntBASIC-1.22□□□□□ -2.6
VIMP08670 RNU6-834P-201ENST00000362367 110 ntBASIC-1.23□□□□□ -2.61
VIMP08670 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.23□□□□□ -2.61
VIMP08670 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.23□□□□□ -2.61
VIMP08670 AL450471.1-201ENST00000447509 127 ntBASIC-1.23□□□□□ -2.61
VIMP08670 RNU6-22P-201ENST00000384355 107 ntBASIC-1.24□□□□□ -2.61
VIMP08670 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.24□□□□□ -2.61
VIMP08670 RNU7-154P-201ENST00000516194 62 ntBASIC-1.24□□□□□ -2.61
VIMP08670 MIR6818-201ENST00000621576 65 ntBASIC-1.24□□□□□ -2.61
VIMP08670 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.24□□□□□ -2.61
VIMP08670 MIR198-201ENST00000637333 62 ntBASIC-1.24□□□□□ -2.61
VIMP08670 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.25□□□□□ -2.61
VIMP08670 SNORD115-27-201ENST00000364430 82 ntBASIC-1.25□□□□□ -2.61
VIMP08670 MIR601-201ENST00000385256 79 ntBASIC-1.25□□□□□ -2.61
VIMP08670 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.25□□□□□ -2.61
VIMP08670 MIR4520-1-201ENST00000582609 70 ntBASIC-1.25□□□□□ -2.61
VIMP08670 MIR365A-201ENST00000362260 87 ntBASIC-1.26□□□□□ -2.61
VIMP08670 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.26□□□□□ -2.61
VIMP08670 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.26□□□□□ -2.61
VIMP08670 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.26□□□□□ -2.61
VIMP08670 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MIR521-2-201ENST00000384818 87 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MIR889-201ENST00000401280 79 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MTATP8P2-201ENST00000435212 202 ntBASIC-1.26□□□□□ -2.61
VIMP08670 AL353691.2-201ENST00000443795 59 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MIR4441-201ENST00000582623 100 ntBASIC-1.26□□□□□ -2.61
VIMP08670 MIR519C-201ENST00000385053 87 ntBASIC-1.27□□□□□ -2.61
VIMP08670 RNU6-518P-201ENST00000516056 96 ntBASIC-1.27□□□□□ -2.61
VIMP08670 MIR519A2-201ENST00000384990 87 ntBASIC-1.28□□□□□ -2.61
VIMP08670 MIR527-201ENST00000385244 85 ntBASIC-1.28□□□□□ -2.61
VIMP08670 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.29□□□□□ -2.62
VIMP08670 RNU6-752P-201ENST00000516376 102 ntBASIC-1.29□□□□□ -2.62
VIMP08670 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.29□□□□□ -2.62
VIMP08670 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.3□□□□□ -2.62
VIMP08670 RNU6-340P-201ENST00000364005 107 ntBASIC-1.31□□□□□ -2.62
VIMP08670 SNORD115-22-201ENST00000364456 82 ntBASIC-1.31□□□□□ -2.62
VIMP08670 RNU6-540P-201ENST00000384622 101 ntBASIC-1.31□□□□□ -2.62
VIMP08670 MIR507-201ENST00000385234 94 ntBASIC-1.31□□□□□ -2.62
VIMP08670 SNORD77.2-201ENST00000391045 68 ntBASIC-1.31□□□□□ -2.62
VIMP08670 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.31□□□□□ -2.62
VIMP08670 AL021921.1-201ENST00000442774 93 ntBASIC-1.31□□□□□ -2.62
VIMP08670 MIR6739-201ENST00000622461 75 ntBASIC-1.31□□□□□ -2.62
VIMP08670 AL031737.1-201ENST00000450125 223 ntBASIC-1.32□□□□□ -2.62
VIMP08670 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.32□□□□□ -2.62
VIMP08670 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
VIMP08670 MIR6502-201ENST00000617296 76 ntBASIC-1.32□□□□□ -2.62
VIMP08670 MIR2052-201ENST00000636055 55 ntBASIC-1.32□□□□□ -2.62
VIMP08670 RNU6-681P-201ENST00000364012 104 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms