Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-209P-201ENST00000384118 107 ntBASIC-0.99□□□□□ -2.57
CD74P04233 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.99□□□□□ -2.57
CD74P04233 snoU83B.1-201ENST00000517136 88 ntBASIC-0.99□□□□□ -2.57
CD74P04233 MIR3165-201ENST00000579874 75 ntBASIC-0.99□□□□□ -2.57
CD74P04233 U7.3-201ENST00000616123 62 ntBASIC-0.99□□□□□ -2.57
CD74P04233 RNU6-704P-201ENST00000364162 103 ntBASIC-1□□□□□ -2.57
CD74P04233 Y_RNA.250-201ENST00000364542 110 ntBASIC-1□□□□□ -2.57
CD74P04233 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1□□□□□ -2.57
CD74P04233 AL450471.1-201ENST00000447509 127 ntBASIC-1□□□□□ -2.57
CD74P04233 MIR3115-201ENST00000577915 68 ntBASIC-1□□□□□ -2.57
CD74P04233 MIR548AG1-201ENST00000579932 66 ntBASIC-1□□□□□ -2.57
CD74P04233 RNU6-554P-201ENST00000410466 106 ntBASIC-1.01□□□□□ -2.57
CD74P04233 RNU6-706P-201ENST00000517229 104 ntBASIC-1.01□□□□□ -2.57
CD74P04233 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.02□□□□□ -2.57
CD74P04233 SNORA19-201ENST00000384737 128 ntBASIC-1.02□□□□□ -2.57
CD74P04233 MIR1468-201ENST00000410600 86 ntBASIC-1.02□□□□□ -2.57
CD74P04233 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.03□□□□□ -2.57
CD74P04233 RNU6-106P-201ENST00000384405 107 ntBASIC-1.03□□□□□ -2.57
CD74P04233 MIR521-2-201ENST00000384818 87 ntBASIC-1.03□□□□□ -2.57
CD74P04233 AP002795.1-201ENST00000534879 84 ntBASIC-1.03□□□□□ -2.57
CD74P04233 AC138207.3-201ENST00000585289 166 ntBASIC-1.03□□□□□ -2.57
CD74P04233 MIR6129-201ENST00000616087 109 ntBASIC-1.03□□□□□ -2.57
CD74P04233 MIR198-201ENST00000637333 62 ntBASIC-1.03□□□□□ -2.57
CD74P04233 RNA5SP26-201ENST00000362406 119 ntBASIC-1.04□□□□□ -2.58
CD74P04233 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.04□□□□□ -2.58
CD74P04233 RNU6-959P-201ENST00000384671 107 ntBASIC-1.04□□□□□ -2.58
CD74P04233 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.04□□□□□ -2.58
CD74P04233 AC008267.6-201ENST00000441664 139 ntBASIC-1.04□□□□□ -2.58
CD74P04233 RNU6-479P-201ENST00000516348 105 ntBASIC-1.04□□□□□ -2.58
CD74P04233 MIR4320-201ENST00000636981 65 ntBASIC-1.04□□□□□ -2.58
CD74P04233 RNU6-924P-201ENST00000362926 108 ntBASIC-1.05□□□□□ -2.58
CD74P04233 SNORD115-27-201ENST00000364430 82 ntBASIC-1.05□□□□□ -2.58
CD74P04233 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.05□□□□□ -2.58
CD74P04233 AL365222.1-201ENST00000614661 98 ntBASIC-1.05□□□□□ -2.58
CD74P04233 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.05□□□□□ -2.58
CD74P04233 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.05□□□□□ -2.58
CD74P04233 MIR6818-201ENST00000621576 65 ntBASIC-1.05□□□□□ -2.58
CD74P04233 MIR601-201ENST00000385256 79 ntBASIC-1.06□□□□□ -2.58
CD74P04233 SNORA26.4-201ENST00000391188 123 ntBASIC-1.06□□□□□ -2.58
CD74P04233 RNU6-518P-201ENST00000516056 96 ntBASIC-1.06□□□□□ -2.58
CD74P04233 RNU6-340P-201ENST00000364005 107 ntBASIC-1.07□□□□□ -2.58
CD74P04233 MIR519A2-201ENST00000384990 87 ntBASIC-1.07□□□□□ -2.58
CD74P04233 MIR519C-201ENST00000385053 87 ntBASIC-1.07□□□□□ -2.58
CD74P04233 MIR889-201ENST00000401280 79 ntBASIC-1.07□□□□□ -2.58
CD74P04233 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.07□□□□□ -2.58
CD74P04233 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.07□□□□□ -2.58
CD74P04233 AC132825.6-201ENST00000638861 357 ntBASIC-1.07□□□□□ -2.58
CD74P04233 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.07□□□□□ -2.58
CD74P04233 RNU6-752P-201ENST00000516376 102 ntBASIC-1.08□□□□□ -2.58
CD74P04233 MIR6739-201ENST00000622461 75 ntBASIC-1.08□□□□□ -2.58
CD74P04233 RNU6-681P-201ENST00000364012 104 ntBASIC-1.09□□□□□ -2.58
CD74P04233 SNORD77.2-201ENST00000391045 68 ntBASIC-1.09□□□□□ -2.58
CD74P04233 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
CD74P04233 SNORD115-33-201ENST00000363723 82 ntBASIC-1.1□□□□□ -2.59
CD74P04233 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.1□□□□□ -2.59
CD74P04233 SNORD19-201ENST00000391191 68 ntBASIC-1.1□□□□□ -2.59
CD74P04233 RNU7-154P-201ENST00000516194 62 ntBASIC-1.1□□□□□ -2.59
CD74P04233 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.1□□□□□ -2.59
CD74P04233 MIR4723-201ENST00000585070 81 ntBASIC-1.1□□□□□ -2.59
CD74P04233 MIR6874-201ENST00000635894 71 ntBASIC-1.1□□□□□ -2.59
CD74P04233 RNU6-766P-201ENST00000362478 107 ntBASIC-1.11□□□□□ -2.59
CD74P04233 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.11□□□□□ -2.59
CD74P04233 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.11□□□□□ -2.59
CD74P04233 MIR29B1-201ENST00000385015 81 ntBASIC-1.11□□□□□ -2.59
CD74P04233 AL035461.1-201ENST00000421490 332 ntBASIC-1.11□□□□□ -2.59
CD74P04233 RNU7-88P-201ENST00000458752 63 ntBASIC-1.11□□□□□ -2.59
CD74P04233 MIR3668-201ENST00000582138 75 ntBASIC-1.11□□□□□ -2.59
CD74P04233 AC091912.2-201ENST00000624798 167 ntBASIC-1.11□□□□□ -2.59
CD74P04233 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.11□□□□□ -2.59
CD74P04233 SNORD115-37-201ENST00000363768 82 ntBASIC-1.12□□□□□ -2.59
CD74P04233 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.12□□□□□ -2.59
CD74P04233 RNU6-246P-201ENST00000384702 107 ntBASIC-1.12□□□□□ -2.59
CD74P04233 RPL35AP4-201ENST00000412007 102 ntBASIC-1.12□□□□□ -2.59
CD74P04233 MIR3671-201ENST00000580455 88 ntBASIC-1.12□□□□□ -2.59
CD74P04233 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.13□□□□□ -2.59
CD74P04233 MIR507-201ENST00000385234 94 ntBASIC-1.13□□□□□ -2.59
CD74P04233 MIR527-201ENST00000385244 85 ntBASIC-1.13□□□□□ -2.59
CD74P04233 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
CD74P04233 HLA-S-202ENST00000425174 53 ntBASIC-1.13□□□□□ -2.59
CD74P04233 MTATP8P2-201ENST00000435212 202 ntBASIC-1.13□□□□□ -2.59
CD74P04233 AL021921.1-201ENST00000442774 93 ntBASIC-1.14□□□□□ -2.59
CD74P04233 RNU6-589P-201ENST00000516485 107 ntBASIC-1.14□□□□□ -2.59
CD74P04233 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.14□□□□□ -2.59
CD74P04233 U7.5-201ENST00000517224 61 ntBASIC-1.14□□□□□ -2.59
CD74P04233 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.15□□□□□ -2.59
CD74P04233 RNU6-81P-201ENST00000365608 104 ntBASIC-1.15□□□□□ -2.59
CD74P04233 MIR548C-201ENST00000384815 97 ntBASIC-1.15□□□□□ -2.59
CD74P04233 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.15□□□□□ -2.59
CD74P04233 RNU4-61P-201ENST00000411243 107 ntBASIC-1.15□□□□□ -2.59
CD74P04233 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.15□□□□□ -2.59
CD74P04233 RNU6-633P-201ENST00000362612 103 ntBASIC-1.16□□□□□ -2.6
CD74P04233 RNU6-732P-201ENST00000516033 103 ntBASIC-1.16□□□□□ -2.6
CD74P04233 RNU6-656P-201ENST00000516785 107 ntBASIC-1.16□□□□□ -2.6
CD74P04233 MIR4668-201ENST00000582284 70 ntBASIC-1.16□□□□□ -2.6
CD74P04233 MIR450A1-201ENST00000362262 91 ntBASIC-1.17□□□□□ -2.6
CD74P04233 AL353691.2-201ENST00000443795 59 ntBASIC-1.17□□□□□ -2.6
CD74P04233 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.17□□□□□ -2.6
CD74P04233 AL031737.1-201ENST00000450125 223 ntBASIC-1.17□□□□□ -2.6
CD74P04233 RNU6-576P-201ENST00000390854 102 ntBASIC-1.18□□□□□ -2.6
CD74P04233 AC090616.4-201ENST00000448026 115 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms