Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-361P-201ENST00000364454 107 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 SNORD116-16-201ENST00000384533 92 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 RNU6-345P-201ENST00000517001 107 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 AC103810.7-201ENST00000607821 91 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 RNU6-277P-201ENST00000516272 106 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 AC090582.1-201ENST00000636321 199 ntBASIC-2.09□□□□□ -2.74
SPTA1P02549 RNY3P8-201ENST00000411366 126 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.1□□□□□ -2.75
SPTA1P02549 RNU7-152P-201ENST00000458982 64 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 SNORD58A-201ENST00000383875 65 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 RNU6-530P-201ENST00000391180 107 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 SNORD127-201ENST00000458892 86 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 RNU7-153P-201ENST00000516455 62 ntBASIC-2.1□□□□□ -2.75
SPTA1P02549 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.11□□□□□ -2.75
SPTA1P02549 SNORA75.5-201ENST00000391291 81 ntBASIC-2.11□□□□□ -2.75
SPTA1P02549 MIR548V-201ENST00000584165 80 ntBASIC-2.11□□□□□ -2.75
SPTA1P02549 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.11□□□□□ -2.75
SPTA1P02549 RNU4-14P-201ENST00000410858 122 ntBASIC-2.11□□□□□ -2.75
SPTA1P02549 RNA5SP136-201ENST00000410906 107 ntBASIC-2.11□□□□□ -2.75
SPTA1P02549 MIR4439-201ENST00000583746 80 ntBASIC-2.11□□□□□ -2.75
SPTA1P02549 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 SNORA27.2-201ENST00000363365 126 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 U2.14-201ENST00000615943 113 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 RNU6-644P-201ENST00000391155 98 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 RNU6-182P-201ENST00000516970 105 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 RNU6-303P-201ENST00000517091 106 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 MIR3675-201ENST00000583661 73 ntBASIC-2.12□□□□□ -2.75
SPTA1P02549 MIR369-201ENST00000362155 70 ntBASIC-2.13□□□□□ -2.75
SPTA1P02549 RNU6-450P-201ENST00000364654 107 ntBASIC-2.13□□□□□ -2.75
SPTA1P02549 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.13□□□□□ -2.75
SPTA1P02549 RNU6-813P-201ENST00000384691 107 ntBASIC-2.13□□□□□ -2.75
SPTA1P02549 AC113195.1-201ENST00000579952 141 ntBASIC-2.13□□□□□ -2.75
SPTA1P02549 MIR7978-201ENST00000636158 59 ntBASIC-2.13□□□□□ -2.75
SPTA1P02549 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.13□□□□□ -2.75
SPTA1P02549 MIR3658-201ENST00000636291 56 ntBASIC-2.13□□□□□ -2.75
SPTA1P02549 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.14□□□□□ -2.75
SPTA1P02549 MIR1302-11-201ENST00000408051 138 ntBASIC-2.14□□□□□ -2.75
SPTA1P02549 MIR1302-9-201ENST00000408365 138 ntBASIC-2.14□□□□□ -2.75
SPTA1P02549 MIR1302-10-201ENST00000408734 138 ntBASIC-2.14□□□□□ -2.75
SPTA1P02549 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.14□□□□□ -2.75
SPTA1P02549 RNU6-956P-201ENST00000458868 103 ntBASIC-2.14□□□□□ -2.75
SPTA1P02549 MIR4643-201ENST00000577473 78 ntBASIC-2.14□□□□□ -2.75
SPTA1P02549 MIR1302-2-201ENST00000607096 138 ntBASIC-2.14□□□□□ -2.75
SPTA1P02549 MIR4426-201ENST00000640330 63 ntBASIC-2.14□□□□□ -2.75
SPTA1P02549 MIR1263-201ENST00000408324 86 ntBASIC-2.15□□□□□ -2.75
SPTA1P02549 MIR202-201ENST00000362219 110 ntBASIC-2.15□□□□□ -2.75
SPTA1P02549 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.15□□□□□ -2.75
SPTA1P02549 RNU6-800P-201ENST00000384473 103 ntBASIC-2.15□□□□□ -2.75
SPTA1P02549 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-2.15□□□□□ -2.75
SPTA1P02549 RNU6-537P-201ENST00000517277 103 ntBASIC-2.15□□□□□ -2.75
SPTA1P02549 MIR519C-201ENST00000385053 87 ntBASIC-2.16□□□□□ -2.75
SPTA1P02549 RNY4P18-201ENST00000391107 89 ntBASIC-2.16□□□□□ -2.75
SPTA1P02549 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.16□□□□□ -2.76
SPTA1P02549 RNU6-587P-201ENST00000391282 106 ntBASIC-2.16□□□□□ -2.76
SPTA1P02549 RNU6-806P-201ENST00000365147 105 ntBASIC-2.17□□□□□ -2.76
SPTA1P02549 SNORD60-201ENST00000383903 83 ntBASIC-2.17□□□□□ -2.76
SPTA1P02549 AL450471.1-201ENST00000447509 127 ntBASIC-2.17□□□□□ -2.76
SPTA1P02549 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.17□□□□□ -2.76
SPTA1P02549 MIR3144-201ENST00000579460 79 ntBASIC-2.17□□□□□ -2.76
SPTA1P02549 AC069439.1-201ENST00000494739 167 ntBASIC-2.17□□□□□ -2.76
SPTA1P02549 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 MIR620-201ENST00000385232 95 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 MIR1236-201ENST00000408340 102 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 RNU6-68P-201ENST00000516576 104 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 MIR5009-201ENST00000578736 100 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 RNU6-823P-201ENST00000391042 103 ntBASIC-2.18□□□□□ -2.76
SPTA1P02549 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.19□□□□□ -2.76
SPTA1P02549 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.19□□□□□ -2.76
SPTA1P02549 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.19□□□□□ -2.76
SPTA1P02549 SNORD45.1-201ENST00000363181 77 ntBASIC-2.19□□□□□ -2.76
SPTA1P02549 RNA5SP173-201ENST00000364857 136 ntBASIC-2.19□□□□□ -2.76
SPTA1P02549 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.19□□□□□ -2.76
SPTA1P02549 RNU6-971P-201ENST00000516920 106 ntBASIC-2.19□□□□□ -2.76
SPTA1P02549 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.2□□□□□ -2.76
SPTA1P02549 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.2□□□□□ -2.76
SPTA1P02549 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.2□□□□□ -2.76
SPTA1P02549 RNU6-584P-201ENST00000410350 95 ntBASIC-2.2□□□□□ -2.76
SPTA1P02549 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.2□□□□□ -2.76
SPTA1P02549 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.2□□□□□ -2.76
SPTA1P02549 MIR1252-201ENST00000408861 65 ntBASIC-2.2□□□□□ -2.76
SPTA1P02549 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.2□□□□□ -2.76
SPTA1P02549 AC020661.2-201ENST00000560114 134 ntBASIC-2.21□□□□□ -2.76
SPTA1P02549 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.21□□□□□ -2.76
SPTA1P02549 RNU6-639P-201ENST00000384074 107 ntBASIC-2.21□□□□□ -2.76
SPTA1P02549 RNY3P16-201ENST00000516338 101 ntBASIC-2.21□□□□□ -2.76
SPTA1P02549 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.21□□□□□ -2.76
SPTA1P02549 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms