Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR527-201ENST00000385244 85 ntBASIC1.08□□□□□ -2.24
PTCD1O75127 SNORA25.18-201ENST00000607153 114 ntBASIC1.08□□□□□ -2.24
PTCD1O75127 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
PTCD1O75127 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PTCD1O75127 Y_RNA.109-201ENST00000363215 102 ntBASIC1.07□□□□□ -2.24
PTCD1O75127 RNU4-33P-201ENST00000364316 85 ntBASIC1.07□□□□□ -2.24
PTCD1O75127 RN7SL793P-201ENST00000583259 296 ntBASIC1.07□□□□□ -2.24
PTCD1O75127 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.06□□□□□ -2.24
PTCD1O75127 MIR216A-201ENST00000385063 110 ntBASIC1.06□□□□□ -2.24
PTCD1O75127 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.06□□□□□ -2.24
PTCD1O75127 PSMC1P5-201ENST00000512850 177 ntBASIC1.06□□□□□ -2.24
PTCD1O75127 RNU6-175P-201ENST00000516896 107 ntBASIC1.06□□□□□ -2.24
PTCD1O75127 MIR7110-201ENST00000612638 86 ntBASIC1.06□□□□□ -2.24
PTCD1O75127 MIR6773-201ENST00000612812 74 ntBASIC1.06□□□□□ -2.24
PTCD1O75127 RNU6-172P-201ENST00000411000 93 ntBASIC1.05□□□□□ -2.24
PTCD1O75127 AC244090.1-201ENST00000441884 93 ntBASIC1.05□□□□□ -2.24
PTCD1O75127 RNU7-188P-201ENST00000517063 64 ntBASIC1.05□□□□□ -2.24
PTCD1O75127 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
PTCD1O75127 SNORA40B-201ENST00000385573 128 ntBASIC1.04□□□□□ -2.24
PTCD1O75127 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.04□□□□□ -2.24
PTCD1O75127 MIR20A-201ENST00000362279 71 ntBASIC1.03□□□□□ -2.24
PTCD1O75127 SNORD115-25-201ENST00000362619 82 ntBASIC1.03□□□□□ -2.24
PTCD1O75127 RNU6-110P-201ENST00000384508 104 ntBASIC1.03□□□□□ -2.24
PTCD1O75127 MIR548F3-201ENST00000408509 87 ntBASIC1.03□□□□□ -2.24
PTCD1O75127 MIR4490-201ENST00000582647 84 ntBASIC1.03□□□□□ -2.24
PTCD1O75127 RNU6-930P-201ENST00000390938 100 ntBASIC1.02□□□□□ -2.25
PTCD1O75127 RNU4-54P-201ENST00000516428 129 ntBASIC1.02□□□□□ -2.25
PTCD1O75127 MIR548X-201ENST00000580069 75 ntBASIC1.02□□□□□ -2.25
PTCD1O75127 RNU6-246P-201ENST00000384702 107 ntBASIC1□□□□□ -2.25
PTCD1O75127 MIRLET7B-201ENST00000385140 83 ntBASIC1□□□□□ -2.25
PTCD1O75127 SNORA40.8-201ENST00000411034 126 ntBASIC1□□□□□ -2.25
PTCD1O75127 SNORD71-201ENST00000411292 86 ntBASIC1□□□□□ -2.25
PTCD1O75127 MIR6835-201ENST00000621552 64 ntBASIC1□□□□□ -2.25
PTCD1O75127 MIR508-201ENST00000384857 115 ntBASIC0.99□□□□□ -2.25
PTCD1O75127 MIR501-201ENST00000390204 84 ntBASIC0.99□□□□□ -2.25
PTCD1O75127 MIR6755-201ENST00000619993 66 ntBASIC0.99□□□□□ -2.25
PTCD1O75127 RNU6-502P-201ENST00000362419 108 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 Y_RNA.423-201ENST00000384057 113 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 RNU6-458P-201ENST00000384179 107 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 MIR579-201ENST00000385221 98 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 RNU6-351P-201ENST00000516097 100 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 RNU7-154P-201ENST00000516194 62 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 MIR5706-201ENST00000579841 80 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 AL590095.2-201ENST00000604136 117 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 U6.58-201ENST00000613107 107 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 MIR6513-201ENST00000621188 64 ntBASIC0.98□□□□□ -2.25
PTCD1O75127 RNU6-924P-201ENST00000362926 108 ntBASIC0.97□□□□□ -2.25
PTCD1O75127 SNORD118-201ENST00000363593 134 ntBASIC0.97□□□□□ -2.25
PTCD1O75127 RNU6-1036P-201ENST00000383959 104 ntBASIC0.97□□□□□ -2.25
PTCD1O75127 MIR4677-201ENST00000584153 80 ntBASIC0.97□□□□□ -2.25
PTCD1O75127 RN7SL660P-201ENST00000614852 299 ntBASIC0.97□□□□□ -2.25
PTCD1O75127 U2.18-201ENST00000622185 84 ntBASIC0.97□□□□□ -2.25
PTCD1O75127 RNU6-598P-201ENST00000364017 105 ntBASIC0.96□□□□□ -2.26
PTCD1O75127 RNU6-782P-201ENST00000516852 104 ntBASIC0.96□□□□□ -2.26
PTCD1O75127 MIR6866-201ENST00000638146 69 ntBASIC0.96□□□□□ -2.26
PTCD1O75127 SNORD114-29-201ENST00000364819 70 ntBASIC0.95□□□□□ -2.26
PTCD1O75127 RNU6-229P-201ENST00000516614 102 ntBASIC0.95□□□□□ -2.26
PTCD1O75127 MIR936-201ENST00000401264 98 ntBASIC0.94□□□□□ -2.26
PTCD1O75127 SNORA2A-201ENST00000383885 135 ntBASIC0.93□□□□□ -2.26
PTCD1O75127 MIR545-201ENST00000385085 106 ntBASIC0.93□□□□□ -2.26
PTCD1O75127 MIR518A1-201ENST00000385068 85 ntBASIC0.92□□□□□ -2.26
PTCD1O75127 RNU6-419P-201ENST00000517030 63 ntBASIC0.91□□□□□ -2.26
PTCD1O75127 MIR3925-201ENST00000584674 77 ntBASIC0.91□□□□□ -2.26
PTCD1O75127 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
PTCD1O75127 Y_RNA.698-201ENST00000516798 118 ntBASIC0.9□□□□□ -2.27
PTCD1O75127 AL353803.5-201ENST00000599815 141 ntBASIC0.9□□□□□ -2.27
PTCD1O75127 RNU7-151P-201ENST00000516930 53 ntBASIC0.89□□□□□ -2.27
PTCD1O75127 RNU6-838P-201ENST00000363399 108 ntBASIC0.88□□□□□ -2.27
PTCD1O75127 RNA5SP193-201ENST00000410353 107 ntBASIC0.88□□□□□ -2.27
PTCD1O75127 MIR499B-201ENST00000636498 73 ntBASIC0.88□□□□□ -2.27
PTCD1O75127 SNORD115-23-201ENST00000364461 82 ntBASIC0.87□□□□□ -2.27
PTCD1O75127 RNU6-945P-201ENST00000383947 107 ntBASIC0.87□□□□□ -2.27
PTCD1O75127 MIR193B-201ENST00000384907 83 ntBASIC0.87□□□□□ -2.27
PTCD1O75127 MIR760-201ENST00000390220 80 ntBASIC0.87□□□□□ -2.27
PTCD1O75127 RNA5SP470-201ENST00000516463 106 ntBASIC0.87□□□□□ -2.27
PTCD1O75127 AC084368.1-201ENST00000620935 65 ntBASIC0.87□□□□□ -2.27
PTCD1O75127 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
PTCD1O75127 Y_RNA.69-201ENST00000362885 109 ntBASIC0.86□□□□□ -2.27
PTCD1O75127 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
PTCD1O75127 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.86□□□□□ -2.27
PTCD1O75127 RNU6-986P-201ENST00000363133 102 ntBASIC0.85□□□□□ -2.27
PTCD1O75127 AC098934.3-201ENST00000430450 190 ntBASIC0.85□□□□□ -2.27
PTCD1O75127 SNORD2-201ENST00000459163 69 ntBASIC0.85□□□□□ -2.27
PTCD1O75127 AP000676.1-201ENST00000533307 52 ntBASIC0.84□□□□□ -2.27
PTCD1O75127 MIR1273G-201ENST00000577677 100 ntBASIC0.84□□□□□ -2.27
PTCD1O75127 MIR4711-201ENST00000578274 70 ntBASIC0.84□□□□□ -2.27
PTCD1O75127 MIR4464-201ENST00000580818 92 ntBASIC0.84□□□□□ -2.27
PTCD1O75127 MIR4432-201ENST00000581823 84 ntBASIC0.84□□□□□ -2.27
PTCD1O75127 U7.6-201ENST00000610841 64 ntBASIC0.84□□□□□ -2.27
PTCD1O75127 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
PTCD1O75127 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
PTCD1O75127 MIR876-201ENST00000401147 81 ntBASIC0.83□□□□□ -2.28
PTCD1O75127 RNU6-1262P-201ENST00000516217 96 ntBASIC0.83□□□□□ -2.28
PTCD1O75127 RNU6-1206P-201ENST00000516339 103 ntBASIC0.83□□□□□ -2.28
PTCD1O75127 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
PTCD1O75127 RNA5SP347-201ENST00000362445 119 ntBASIC0.82□□□□□ -2.28
PTCD1O75127 SNORD114-23-201ENST00000363536 72 ntBASIC0.82□□□□□ -2.28
PTCD1O75127 RNA5SP499-201ENST00000363982 119 ntBASIC0.82□□□□□ -2.28
PTCD1O75127 RNA5SP128-201ENST00000365305 116 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms