Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-848P-201ENST00000515948 107 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-617P-201ENST00000516147 107 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-473P-201ENST00000516164 107 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-1049P-201ENST00000516414 107 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-782P-201ENST00000516852 104 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 MIR6755-201ENST00000619993 66 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 Y_RNA.676-201ENST00000516393 96 ntBASIC0.75□□□□□ -2.29
TRIM13O60858 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
TRIM13O60858 MIR518A1-201ENST00000385068 85 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 SNORD71-201ENST00000411292 86 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 RNU4-54P-201ENST00000516428 129 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 RNU6-419P-201ENST00000517030 63 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
TRIM13O60858 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
TRIM13O60858 RN7SL660P-201ENST00000614852 299 ntBASIC0.73□□□□□ -2.29
TRIM13O60858 AC084368.1-201ENST00000620935 65 ntBASIC0.73□□□□□ -2.29
TRIM13O60858 RNU6-838P-201ENST00000363399 108 ntBASIC0.72□□□□□ -2.29
TRIM13O60858 SNORD115-23-201ENST00000364461 82 ntBASIC0.72□□□□□ -2.29
TRIM13O60858 AL353803.5-201ENST00000599815 141 ntBASIC0.72□□□□□ -2.29
TRIM13O60858 RNU6-598P-201ENST00000364017 105 ntBASIC0.71□□□□□ -2.3
TRIM13O60858 MIR760-201ENST00000390220 80 ntBASIC0.71□□□□□ -2.3
TRIM13O60858 MIR876-201ENST00000401147 81 ntBASIC0.71□□□□□ -2.3
TRIM13O60858 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
TRIM13O60858 RNU7-160P-201ENST00000516660 62 ntBASIC0.7□□□□□ -2.3
TRIM13O60858 MIR3925-201ENST00000584674 77 ntBASIC0.7□□□□□ -2.3
TRIM13O60858 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
TRIM13O60858 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
TRIM13O60858 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 RNA5SP128-201ENST00000365305 116 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 RNA5SP102-201ENST00000516865 106 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 U2.18-201ENST00000622185 84 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 MIR96-201ENST00000362288 78 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 Y_RNA.164-201ENST00000363709 102 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 MIR579-201ENST00000385221 98 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 RNU6-1206P-201ENST00000516339 103 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 RNU7-151P-201ENST00000516930 53 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRIM13O60858 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
TRIM13O60858 Y_RNA.69-201ENST00000362885 109 ntBASIC0.67□□□□□ -2.3
TRIM13O60858 RNU6-924P-201ENST00000362926 108 ntBASIC0.67□□□□□ -2.3
TRIM13O60858 MIR106A-201ENST00000384870 81 ntBASIC0.67□□□□□ -2.3
TRIM13O60858 RNU6-247P-201ENST00000362636 107 ntBASIC0.66□□□□□ -2.3
TRIM13O60858 RNU1-93P-201ENST00000364704 169 ntBASIC0.66□□□□□ -2.3
TRIM13O60858 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
TRIM13O60858 Y_RNA.698-201ENST00000516798 118 ntBASIC0.66□□□□□ -2.3
TRIM13O60858 MIR545-201ENST00000385085 106 ntBASIC0.65□□□□□ -2.31
TRIM13O60858 MIR1276-201ENST00000408707 83 ntBASIC0.65□□□□□ -2.31
TRIM13O60858 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.65□□□□□ -2.31
TRIM13O60858 AC108676.2-201ENST00000605225 163 ntBASIC0.65□□□□□ -2.31
TRIM13O60858 MIR499B-201ENST00000636498 73 ntBASIC0.65□□□□□ -2.31
TRIM13O60858 RNU6-863P-201ENST00000515989 104 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 RNU6-1262P-201ENST00000516217 96 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 AP000676.1-201ENST00000533307 52 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 MIR4432-201ENST00000581823 84 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 MIR125B1-201ENST00000385236 88 ntBASIC0.63□□□□□ -2.31
TRIM13O60858 RNU6-696P-201ENST00000390834 107 ntBASIC0.63□□□□□ -2.31
TRIM13O60858 RNA5SP247-201ENST00000411181 105 ntBASIC0.63□□□□□ -2.31
TRIM13O60858 MIR499A-201ENST00000384903 122 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 MIR548AA1-201ENST00000384971 97 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 RNU7-129P-201ENST00000516128 62 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 RNA5SP220-201ENST00000516298 104 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 SCARNA11.2-201ENST00000517183 154 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 MIR6504-201ENST00000613520 61 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 MIR8070-201ENST00000616510 88 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 Y_RNA.224-201ENST00000364308 111 ntBASIC0.61□□□□□ -2.31
TRIM13O60858 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
TRIM13O60858 SNORD44.1-201ENST00000363202 61 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 RNU6-828P-201ENST00000364876 107 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 RNU6-42P-201ENST00000384165 107 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 MIR329-2-201ENST00000385029 84 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 RNU6-995P-201ENST00000391244 107 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 MIR4464-201ENST00000580818 92 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 snoR1.1-201ENST00000628177 80 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 RNA5SP98-201ENST00000363158 137 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 MIR1287-201ENST00000408492 90 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 RNU6-1267P-201ENST00000410747 107 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 SNORD57-201ENST00000448188 72 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 AL451105.1-201ENST00000450005 189 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 MIR6888-201ENST00000621977 67 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 Y_RNA.118-201ENST00000363300 101 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 SNORD114-22-201ENST00000365423 72 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 U7.5-201ENST00000517224 61 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 RNU7-55P-201ENST00000459426 62 ntBASIC0.57□□□□□ -2.32
TRIM13O60858 MIR548AL-201ENST00000578416 97 ntBASIC0.57□□□□□ -2.32
TRIM13O60858 MIR4452-201ENST00000583004 71 ntBASIC0.57□□□□□ -2.32
TRIM13O60858 AL445584.3-201ENST00000617173 78 ntBASIC0.57□□□□□ -2.32
TRIM13O60858 SNORA62.4-201ENST00000365504 151 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 snoU13.18-201ENST00000459483 104 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 AC108740.1-201ENST00000498629 225 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 RNU6-1174P-201ENST00000517278 101 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms