Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-848P-201ENST00000515948 107 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-617P-201ENST00000516147 107 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-473P-201ENST00000516164 107 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-1049P-201ENST00000516414 107 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-782P-201ENST00000516852 104 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 MIR6755-201ENST00000619993 66 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 Y_RNA.676-201ENST00000516393 96 ntBASIC0.75□□□□□ -2.29
TRIM13O60858 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
TRIM13O60858 MIR518A1-201ENST00000385068 85 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 SNORD71-201ENST00000411292 86 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 RNU4-54P-201ENST00000516428 129 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 RNU6-419P-201ENST00000517030 63 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
TRIM13O60858 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
TRIM13O60858 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
TRIM13O60858 RN7SL660P-201ENST00000614852 299 ntBASIC0.73□□□□□ -2.29
TRIM13O60858 AC084368.1-201ENST00000620935 65 ntBASIC0.73□□□□□ -2.29
TRIM13O60858 RNU6-838P-201ENST00000363399 108 ntBASIC0.72□□□□□ -2.29
TRIM13O60858 SNORD115-23-201ENST00000364461 82 ntBASIC0.72□□□□□ -2.29
TRIM13O60858 AL353803.5-201ENST00000599815 141 ntBASIC0.72□□□□□ -2.29
TRIM13O60858 RNU6-598P-201ENST00000364017 105 ntBASIC0.71□□□□□ -2.3
TRIM13O60858 MIR760-201ENST00000390220 80 ntBASIC0.71□□□□□ -2.3
TRIM13O60858 MIR876-201ENST00000401147 81 ntBASIC0.71□□□□□ -2.3
TRIM13O60858 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
TRIM13O60858 RNU7-160P-201ENST00000516660 62 ntBASIC0.7□□□□□ -2.3
TRIM13O60858 MIR3925-201ENST00000584674 77 ntBASIC0.7□□□□□ -2.3
TRIM13O60858 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
TRIM13O60858 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
TRIM13O60858 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 RNA5SP128-201ENST00000365305 116 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 RNA5SP102-201ENST00000516865 106 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 U2.18-201ENST00000622185 84 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
TRIM13O60858 MIR96-201ENST00000362288 78 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 Y_RNA.164-201ENST00000363709 102 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 MIR579-201ENST00000385221 98 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 RNU6-1206P-201ENST00000516339 103 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 RNU7-151P-201ENST00000516930 53 ntBASIC0.68□□□□□ -2.3
TRIM13O60858 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRIM13O60858 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
TRIM13O60858 Y_RNA.69-201ENST00000362885 109 ntBASIC0.67□□□□□ -2.3
TRIM13O60858 RNU6-924P-201ENST00000362926 108 ntBASIC0.67□□□□□ -2.3
TRIM13O60858 MIR106A-201ENST00000384870 81 ntBASIC0.67□□□□□ -2.3
TRIM13O60858 RNU6-247P-201ENST00000362636 107 ntBASIC0.66□□□□□ -2.3
TRIM13O60858 RNU1-93P-201ENST00000364704 169 ntBASIC0.66□□□□□ -2.3
TRIM13O60858 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
TRIM13O60858 Y_RNA.698-201ENST00000516798 118 ntBASIC0.66□□□□□ -2.3
TRIM13O60858 MIR545-201ENST00000385085 106 ntBASIC0.65□□□□□ -2.31
TRIM13O60858 MIR1276-201ENST00000408707 83 ntBASIC0.65□□□□□ -2.31
TRIM13O60858 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.65□□□□□ -2.31
TRIM13O60858 AC108676.2-201ENST00000605225 163 ntBASIC0.65□□□□□ -2.31
TRIM13O60858 MIR499B-201ENST00000636498 73 ntBASIC0.65□□□□□ -2.31
TRIM13O60858 RNU6-863P-201ENST00000515989 104 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 RNU6-1262P-201ENST00000516217 96 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 AP000676.1-201ENST00000533307 52 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 MIR4432-201ENST00000581823 84 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
TRIM13O60858 MIR125B1-201ENST00000385236 88 ntBASIC0.63□□□□□ -2.31
TRIM13O60858 RNU6-696P-201ENST00000390834 107 ntBASIC0.63□□□□□ -2.31
TRIM13O60858 RNA5SP247-201ENST00000411181 105 ntBASIC0.63□□□□□ -2.31
TRIM13O60858 MIR499A-201ENST00000384903 122 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 MIR548AA1-201ENST00000384971 97 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 RNU7-129P-201ENST00000516128 62 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 RNA5SP220-201ENST00000516298 104 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 SCARNA11.2-201ENST00000517183 154 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 MIR6504-201ENST00000613520 61 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 MIR8070-201ENST00000616510 88 ntBASIC0.62□□□□□ -2.31
TRIM13O60858 Y_RNA.224-201ENST00000364308 111 ntBASIC0.61□□□□□ -2.31
TRIM13O60858 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
TRIM13O60858 SNORD44.1-201ENST00000363202 61 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 RNU6-828P-201ENST00000364876 107 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 RNU6-42P-201ENST00000384165 107 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 MIR329-2-201ENST00000385029 84 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 RNU6-995P-201ENST00000391244 107 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 MIR4464-201ENST00000580818 92 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 snoR1.1-201ENST00000628177 80 ntBASIC0.6□□□□□ -2.31
TRIM13O60858 RNA5SP98-201ENST00000363158 137 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 MIR1287-201ENST00000408492 90 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 RNU6-1267P-201ENST00000410747 107 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 SNORD57-201ENST00000448188 72 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 AL451105.1-201ENST00000450005 189 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 MIR6888-201ENST00000621977 67 ntBASIC0.59□□□□□ -2.31
TRIM13O60858 Y_RNA.118-201ENST00000363300 101 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 SNORD114-22-201ENST00000365423 72 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 U7.5-201ENST00000517224 61 ntBASIC0.58□□□□□ -2.32
TRIM13O60858 RNU7-55P-201ENST00000459426 62 ntBASIC0.57□□□□□ -2.32
TRIM13O60858 MIR548AL-201ENST00000578416 97 ntBASIC0.57□□□□□ -2.32
TRIM13O60858 MIR4452-201ENST00000583004 71 ntBASIC0.57□□□□□ -2.32
TRIM13O60858 AL445584.3-201ENST00000617173 78 ntBASIC0.57□□□□□ -2.32
TRIM13O60858 SNORA62.4-201ENST00000365504 151 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 snoU13.18-201ENST00000459483 104 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 AC108740.1-201ENST00000498629 225 ntBASIC0.56□□□□□ -2.32
TRIM13O60858 RNU6-1174P-201ENST00000517278 101 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms