Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RNU6-974P-201ENST00000384099 108 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 MTND2P23-201ENST00000422990 651 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 RNU7-152P-201ENST00000458982 64 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 RNU7-174P-201ENST00000516248 59 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 RNU7-153P-201ENST00000516455 62 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 SNORA27.2-201ENST00000363365 126 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 SNORD115-31-201ENST00000365318 82 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 MIR1236-201ENST00000408340 102 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 MIR4777-201ENST00000583710 86 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 AC013734.1-201ENST00000619329 111 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 AC078883.4-201ENST00000623218 367 ntBASIC-1.16□□□□□ -2.6
CACNA1AO00555 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 MIR579-201ENST00000385221 98 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 RNU6-823P-201ENST00000391042 103 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 MIR1263-201ENST00000408324 86 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 RNU4-14P-201ENST00000410858 122 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 RNY4P25-201ENST00000459254 96 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 AC103810.7-201ENST00000607821 91 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 AL160413.1-201ENST00000622780 310 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 MIR125B1-201ENST00000385236 88 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 MIR1252-201ENST00000408861 65 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 RNU6-506P-201ENST00000516553 94 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.17□□□□□ -2.6
CACNA1AO00555 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 SNORD58A-201ENST00000383875 65 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 SNORA41B-201ENST00000384785 128 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 AC113195.1-201ENST00000579952 141 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 MIR548V-201ENST00000584165 80 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 RNY3P2-201ENST00000362918 102 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 RNY4P18-201ENST00000391107 89 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 MIR3658-201ENST00000636291 56 ntBASIC-1.18□□□□□ -2.6
CACNA1AO00555 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 RNU7-61P-201ENST00000515897 61 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 RNU6-345P-201ENST00000517001 107 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 MIR3688-2-201ENST00000636963 87 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 RNU6-303P-201ENST00000517091 106 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 MIR3646-201ENST00000578301 84 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.19□□□□□ -2.6
CACNA1AO00555 AC090971.5-201ENST00000621102 293 ntBASIC-1.19□□□□□ -2.6
CACNA1AO00555 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.2□□□□□ -2.6
CACNA1AO00555 RNU6-718P-201ENST00000516166 105 ntBASIC-1.2□□□□□ -2.6
CACNA1AO00555 RNU4-71P-201ENST00000516258 113 ntBASIC-1.2□□□□□ -2.6
CACNA1AO00555 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.2□□□□□ -2.6
CACNA1AO00555 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.2□□□□□ -2.6
CACNA1AO00555 RNU6-182P-201ENST00000516970 105 ntBASIC-1.2□□□□□ -2.6
CACNA1AO00555 MIR4694-201ENST00000578534 80 ntBASIC-1.2□□□□□ -2.6
CACNA1AO00555 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.2□□□□□ -2.6
CACNA1AO00555 SNORD114-13-201ENST00000364377 74 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 RNU6-361P-201ENST00000364454 107 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 SNORD116-16-201ENST00000384533 92 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 MTND5P22-201ENST00000458380 195 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 RNU6-624P-201ENST00000363411 107 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 RNU6-450P-201ENST00000364654 107 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 AC069439.1-201ENST00000494739 167 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 MIR5009-201ENST00000578736 100 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.21□□□□□ -2.6
CACNA1AO00555 RNU6-834P-201ENST00000362367 110 ntBASIC-1.22□□□□□ -2.6
CACNA1AO00555 SNORD113-3-201ENST00000364830 72 ntBASIC-1.22□□□□□ -2.6
CACNA1AO00555 RNU6-669P-201ENST00000365575 107 ntBASIC-1.22□□□□□ -2.6
CACNA1AO00555 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.22□□□□□ -2.6
CACNA1AO00555 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.22□□□□□ -2.6
CACNA1AO00555 RNU6-239P-201ENST00000390990 99 ntBASIC-1.22□□□□□ -2.6
CACNA1AO00555 RNU6-537P-201ENST00000517277 103 ntBASIC-1.22□□□□□ -2.6
CACNA1AO00555 MIR4679-2-201ENST00000578358 77 ntBASIC-1.22□□□□□ -2.6
CACNA1AO00555 SNORD45.1-201ENST00000363181 77 ntBASIC-1.22□□□□□ -2.61
CACNA1AO00555 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.22□□□□□ -2.61
CACNA1AO00555 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.22□□□□□ -2.61
CACNA1AO00555 RNU6-800P-201ENST00000384473 103 ntBASIC-1.22□□□□□ -2.61
CACNA1AO00555 RNU6-530P-201ENST00000391180 107 ntBASIC-1.22□□□□□ -2.61
CACNA1AO00555 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.22□□□□□ -2.61
CACNA1AO00555 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.22□□□□□ -2.61
CACNA1AO00555 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.22□□□□□ -2.61
CACNA1AO00555 MIR7978-201ENST00000636158 59 ntBASIC-1.22□□□□□ -2.61
CACNA1AO00555 MIR202-201ENST00000362219 110 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 RNU6-639P-201ENST00000384074 107 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 MIR519C-201ENST00000385053 87 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 RNU6-554P-201ENST00000410466 106 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 AL158147.1-201ENST00000443970 75 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 RNY3P16-201ENST00000516338 101 ntBASIC-1.23□□□□□ -2.61
CACNA1AO00555 MIR4643-201ENST00000577473 78 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms