Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
RFXAPO00287 RNU4-45P-201ENST00000365469 141 ntBASIC0.86□□□□□ -2.27
RFXAPO00287 MIR140-201ENST00000385282 100 ntBASIC0.86□□□□□ -2.27
RFXAPO00287 MIR1255B2-201ENST00000408618 67 ntBASIC0.86□□□□□ -2.27
RFXAPO00287 MIR1197-201ENST00000408818 88 ntBASIC0.86□□□□□ -2.27
RFXAPO00287 RNU7-188P-201ENST00000517063 64 ntBASIC0.86□□□□□ -2.27
RFXAPO00287 AC243829.6-201ENST00000612652 106 ntBASIC0.85□□□□□ -2.27
RFXAPO00287 AC243829.3-201ENST00000622177 108 ntBASIC0.85□□□□□ -2.27
RFXAPO00287 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
RFXAPO00287 Y_RNA.423-201ENST00000384057 113 ntBASIC0.84□□□□□ -2.27
RFXAPO00287 MIR519A2-201ENST00000384990 87 ntBASIC0.84□□□□□ -2.27
RFXAPO00287 RNU6-175P-201ENST00000516896 107 ntBASIC0.84□□□□□ -2.27
RFXAPO00287 MIR6755-201ENST00000619993 66 ntBASIC0.84□□□□□ -2.27
RFXAPO00287 RNA5SP62-201ENST00000363457 110 ntBASIC0.83□□□□□ -2.28
RFXAPO00287 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
RFXAPO00287 RNA5SP476-201ENST00000516613 103 ntBASIC0.83□□□□□ -2.28
RFXAPO00287 MIR4711-201ENST00000578274 70 ntBASIC0.83□□□□□ -2.28
RFXAPO00287 SNORD118-201ENST00000363593 134 ntBASIC0.82□□□□□ -2.28
RFXAPO00287 MIR501-201ENST00000390204 84 ntBASIC0.82□□□□□ -2.28
RFXAPO00287 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
RFXAPO00287 RNU6-231P-201ENST00000517122 103 ntBASIC0.82□□□□□ -2.28
RFXAPO00287 Y_RNA.282-201ENST00000364793 102 ntBASIC0.81□□□□□ -2.28
RFXAPO00287 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.81□□□□□ -2.28
RFXAPO00287 AC098934.3-201ENST00000430450 190 ntBASIC0.81□□□□□ -2.28
RFXAPO00287 AC244090.1-201ENST00000441884 93 ntBASIC0.81□□□□□ -2.28
RFXAPO00287 MIR6773-201ENST00000612812 74 ntBASIC0.81□□□□□ -2.28
RFXAPO00287 MIR20A-201ENST00000362279 71 ntBASIC0.8□□□□□ -2.28
RFXAPO00287 MIR330-201ENST00000362196 94 ntBASIC0.79□□□□□ -2.28
RFXAPO00287 SNORD116-16-201ENST00000384533 92 ntBASIC0.79□□□□□ -2.28
RFXAPO00287 AL021921.1-201ENST00000442774 93 ntBASIC0.79□□□□□ -2.28
RFXAPO00287 RNU6-229P-201ENST00000516614 102 ntBASIC0.79□□□□□ -2.28
RFXAPO00287 MIR4677-201ENST00000584153 80 ntBASIC0.79□□□□□ -2.28
RFXAPO00287 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RFXAPO00287 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
RFXAPO00287 SNORA40.8-201ENST00000411034 126 ntBASIC0.78□□□□□ -2.28
RFXAPO00287 SNORA40.16-201ENST00000517238 121 ntBASIC0.78□□□□□ -2.28
RFXAPO00287 MIR5706-201ENST00000579841 80 ntBASIC0.78□□□□□ -2.28
RFXAPO00287 RN7SL660P-201ENST00000614852 299 ntBASIC0.78□□□□□ -2.28
RFXAPO00287 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
RFXAPO00287 Y_RNA.74-201ENST00000362911 99 ntBASIC0.77□□□□□ -2.29
RFXAPO00287 SNORA2A-201ENST00000383885 135 ntBASIC0.77□□□□□ -2.29
RFXAPO00287 RNU6-1036P-201ENST00000383959 104 ntBASIC0.77□□□□□ -2.29
RFXAPO00287 RNU6-808P-201ENST00000391233 108 ntBASIC0.77□□□□□ -2.29
RFXAPO00287 SNORD116.2-201ENST00000391251 93 ntBASIC0.77□□□□□ -2.29
RFXAPO00287 RNU4-88P-201ENST00000411220 86 ntBASIC0.77□□□□□ -2.29
RFXAPO00287 MIR2909-201ENST00000617113 69 ntBASIC0.77□□□□□ -2.29
RFXAPO00287 SNORD115-25-201ENST00000362619 82 ntBASIC0.76□□□□□ -2.29
RFXAPO00287 SNORD1B-201ENST00000363091 84 ntBASIC0.76□□□□□ -2.29
RFXAPO00287 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
RFXAPO00287 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
RFXAPO00287 MIR527-201ENST00000385244 85 ntBASIC0.76□□□□□ -2.29
RFXAPO00287 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
RFXAPO00287 RNA5SP347-201ENST00000362445 119 ntBASIC0.75□□□□□ -2.29
RFXAPO00287 SNORD114-29-201ENST00000364819 70 ntBASIC0.75□□□□□ -2.29
RFXAPO00287 RNU6-520P-201ENST00000384717 104 ntBASIC0.75□□□□□ -2.29
RFXAPO00287 MIRLET7B-201ENST00000385140 83 ntBASIC0.75□□□□□ -2.29
RFXAPO00287 MIR760-201ENST00000390220 80 ntBASIC0.75□□□□□ -2.29
RFXAPO00287 MIR4661-201ENST00000582720 75 ntBASIC0.75□□□□□ -2.29
RFXAPO00287 Y_RNA.109-201ENST00000363215 102 ntBASIC0.74□□□□□ -2.29
RFXAPO00287 RNA5SP499-201ENST00000363982 119 ntBASIC0.74□□□□□ -2.29
RFXAPO00287 MIR518A1-201ENST00000385068 85 ntBASIC0.74□□□□□ -2.29
RFXAPO00287 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.74□□□□□ -2.29
RFXAPO00287 MIR3925-201ENST00000584674 77 ntBASIC0.74□□□□□ -2.29
RFXAPO00287 MIR499B-201ENST00000636498 73 ntBASIC0.74□□□□□ -2.29
RFXAPO00287 RNU6-502P-201ENST00000362419 108 ntBASIC0.73□□□□□ -2.29
RFXAPO00287 HAR1A.1-201ENST00000459583 118 ntBASIC0.73□□□□□ -2.29
RFXAPO00287 RNU6-782P-201ENST00000516852 104 ntBASIC0.73□□□□□ -2.29
RFXAPO00287 RNU6-980P-201ENST00000516925 103 ntBASIC0.73□□□□□ -2.29
RFXAPO00287 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
RFXAPO00287 RNU7-129P-201ENST00000516128 62 ntBASIC0.72□□□□□ -2.29
RFXAPO00287 RNU6-753P-201ENST00000363926 107 ntBASIC0.71□□□□□ -2.3
RFXAPO00287 RNU6-172P-201ENST00000411000 93 ntBASIC0.71□□□□□ -2.3
RFXAPO00287 SNORD71-201ENST00000411292 86 ntBASIC0.71□□□□□ -2.3
RFXAPO00287 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
RFXAPO00287 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.71□□□□□ -2.3
RFXAPO00287 RNU6-810P-201ENST00000364001 107 ntBASIC0.7□□□□□ -2.3
RFXAPO00287 Y_RNA.379-201ENST00000365653 102 ntBASIC0.7□□□□□ -2.3
RFXAPO00287 RNU7-119P-201ENST00000459279 63 ntBASIC0.7□□□□□ -2.3
RFXAPO00287 RNU7-154P-201ENST00000516194 62 ntBASIC0.7□□□□□ -2.3
RFXAPO00287 AC084368.1-201ENST00000620935 65 ntBASIC0.7□□□□□ -2.3
RFXAPO00287 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
RFXAPO00287 RNU6-35P-201ENST00000384530 107 ntBASIC0.69□□□□□ -2.3
RFXAPO00287 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.69□□□□□ -2.3
RFXAPO00287 MIR7110-201ENST00000612638 86 ntBASIC0.69□□□□□ -2.3
RFXAPO00287 RNU6-458P-201ENST00000384179 107 ntBASIC0.68□□□□□ -2.3
RFXAPO00287 RNU6-246P-201ENST00000384702 107 ntBASIC0.68□□□□□ -2.3
RFXAPO00287 U6.58-201ENST00000613107 107 ntBASIC0.68□□□□□ -2.3
RFXAPO00287 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
RFXAPO00287 RNA5SP128-201ENST00000365305 116 ntBASIC0.67□□□□□ -2.3
RFXAPO00287 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
RFXAPO00287 MIR579-201ENST00000385221 98 ntBASIC0.67□□□□□ -2.3
RFXAPO00287 AP000676.1-201ENST00000533307 52 ntBASIC0.67□□□□□ -2.3
RFXAPO00287 U7.6-201ENST00000610841 64 ntBASIC0.67□□□□□ -2.3
RFXAPO00287 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.67□□□□□ -2.3
RFXAPO00287 U2.18-201ENST00000622185 84 ntBASIC0.67□□□□□ -2.3
RFXAPO00287 SNORA40B-201ENST00000385573 128 ntBASIC0.66□□□□□ -2.3
RFXAPO00287 MIR4490-201ENST00000582647 84 ntBASIC0.66□□□□□ -2.3
RFXAPO00287 AL353803.5-201ENST00000599815 141 ntBASIC0.66□□□□□ -2.3
RFXAPO00287 MIR103A1-201ENST00000362165 78 ntBASIC0.65□□□□□ -2.31
RFXAPO00287 RNU6-598P-201ENST00000364017 105 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 408.9 ms