Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.82□□□□□ -2.7
SMKR1H3BMG3 U7.3-201ENST00000616123 62 ntBASIC-1.82□□□□□ -2.7
SMKR1H3BMG3 MIR6086-201ENST00000638065 55 ntBASIC-1.82□□□□□ -2.7
SMKR1H3BMG3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 SNORD116-14-201ENST00000383894 92 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 SNORD116-17-201ENST00000383929 92 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 SNORD116-15-201ENST00000384445 92 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 SNORD116-19-201ENST00000384729 92 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 AL035461.1-201ENST00000421490 332 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 RNU6-162P-201ENST00000516228 103 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 RNU6-656P-201ENST00000516785 107 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 AC138207.3-201ENST00000585289 166 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 AC099654.10-201ENST00000640395 161 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.84□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.84□□□□□ -2.7
SMKR1H3BMG3 U7.5-201ENST00000517224 61 ntBASIC-1.84□□□□□ -2.7
SMKR1H3BMG3 MIR4490-201ENST00000582647 84 ntBASIC-1.84□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.85□□□□□ -2.71
SMKR1H3BMG3 MIR519C-201ENST00000385053 87 ntBASIC-1.85□□□□□ -2.71
SMKR1H3BMG3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.85□□□□□ -2.71
SMKR1H3BMG3 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.85□□□□□ -2.71
SMKR1H3BMG3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 RNU2-51P-201ENST00000410708 197 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 RNU7-88P-201ENST00000458752 63 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 U2.7-201ENST00000619197 100 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 MIR5683-201ENST00000636514 76 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.87□□□□□ -2.71
SMKR1H3BMG3 RNU6-246P-201ENST00000384702 107 ntBASIC-1.87□□□□□ -2.71
SMKR1H3BMG3 SNORD115-27-201ENST00000364430 82 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNU6-30P-201ENST00000384561 107 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNU6-109P-201ENST00000516364 107 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNU6-184P-201ENST00000516514 107 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNA5SP395-201ENST00000516567 118 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 MIR548AG1-201ENST00000579932 66 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
SMKR1H3BMG3 SNORD19-201ENST00000391191 68 ntBASIC-1.89□□□□□ -2.71
SMKR1H3BMG3 snoU13.19-201ENST00000459148 104 ntBASIC-1.89□□□□□ -2.71
SMKR1H3BMG3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.91□□□□□ -2.72
SMKR1H3BMG3 AP002795.1-201ENST00000534879 84 ntBASIC-1.91□□□□□ -2.72
SMKR1H3BMG3 SNORD115-37-201ENST00000363768 82 ntBASIC-1.92□□□□□ -2.72
SMKR1H3BMG3 MIR8485-201ENST00000401372 91 ntBASIC-1.92□□□□□ -2.72
SMKR1H3BMG3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.92□□□□□ -2.72
SMKR1H3BMG3 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.92□□□□□ -2.72
SMKR1H3BMG3 RNU6-774P-201ENST00000363238 107 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 RNU6-106P-201ENST00000384405 107 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 RNU6-554P-201ENST00000410466 106 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 MTATP8P2-201ENST00000435212 202 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 AC091912.2-201ENST00000624798 167 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 MIR548C-201ENST00000384815 97 ntBASIC-1.94□□□□□ -2.72
SMKR1H3BMG3 AL078595.1-201ENST00000404458 226 ntBASIC-1.94□□□□□ -2.72
SMKR1H3BMG3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.95□□□□□ -2.72
SMKR1H3BMG3 RNU6-633P-201ENST00000362612 103 ntBASIC-1.96□□□□□ -2.72
SMKR1H3BMG3 MIR889-201ENST00000401280 79 ntBASIC-1.96□□□□□ -2.72
SMKR1H3BMG3 MIR548Q-201ENST00000408404 100 ntBASIC-1.97□□□□□ -2.72
SMKR1H3BMG3 RNU6-624P-201ENST00000363411 107 ntBASIC-1.98□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.98□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.98□□□□□ -2.73
SMKR1H3BMG3 MIR3115-201ENST00000577915 68 ntBASIC-1.98□□□□□ -2.73
SMKR1H3BMG3 RNU6-478P-201ENST00000363904 110 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 AC090616.4-201ENST00000448026 115 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 MIR6874-201ENST00000635894 71 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 RNU6-766P-201ENST00000362478 107 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 RNU6-458P-201ENST00000384179 107 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 SNORA19-201ENST00000384737 128 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 RNU6-1064P-201ENST00000410626 104 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 AC093729.1-201ENST00000513074 128 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 MIR3675-201ENST00000583661 73 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 U6.58-201ENST00000613107 107 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 HLA-S-202ENST00000425174 53 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 RNU7-174P-201ENST00000516248 59 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 MIR4668-201ENST00000582284 70 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 AC090425.1-201ENST00000610007 140 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 MIR6502-201ENST00000617296 76 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 MIR4320-201ENST00000636981 65 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 RNU6-704P-201ENST00000364162 103 ntBASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 MIR4770-201ENST00000579149 58 ntBASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 MIR2052-201ENST00000636055 55 ntBASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 MIR429-201ENST00000362106 83 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 RNU6-696P-201ENST00000390834 107 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 AC008267.6-201ENST00000441664 139 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 RNA5SP67-201ENST00000516422 131 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 RNU6-794P-201ENST00000517261 64 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 MIR5591-201ENST00000578248 65 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 MIR409-201ENST00000362237 79 ntBASIC-2.04□□□□□ -2.74
SMKR1H3BMG3 RNU6-168P-201ENST00000516189 101 ntBASIC-2.04□□□□□ -2.74
SMKR1H3BMG3 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.04□□□□□ -2.74
SMKR1H3BMG3 RNU6-303P-201ENST00000517091 106 ntBASIC-2.04□□□□□ -2.74
SMKR1H3BMG3 RNU6-959P-201ENST00000384671 107 ntBASIC-2.05□□□□□ -2.74
SMKR1H3BMG3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.05□□□□□ -2.74
SMKR1H3BMG3 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 235.3 ms