Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNA5SP128-201ENST00000365305 116 ntBASIC1.06□□□□□ -2.24
RCCD1A6NED2 SNORA40B-201ENST00000385573 128 ntBASIC1.06□□□□□ -2.24
RCCD1A6NED2 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
RCCD1A6NED2 MIR6504-201ENST00000613520 61 ntBASIC1.06□□□□□ -2.24
RCCD1A6NED2 RNU6-172P-201ENST00000411000 93 ntBASIC1.05□□□□□ -2.24
RCCD1A6NED2 RNU6-863P-201ENST00000515989 104 ntBASIC1.05□□□□□ -2.24
RCCD1A6NED2 SNORD1B-201ENST00000363091 84 ntBASIC1.04□□□□□ -2.24
RCCD1A6NED2 RN7SL660P-201ENST00000614852 299 ntBASIC1.04□□□□□ -2.24
RCCD1A6NED2 RNU6-458P-201ENST00000384179 107 ntBASIC1.03□□□□□ -2.24
RCCD1A6NED2 MIR876-201ENST00000401147 81 ntBASIC1.03□□□□□ -2.24
RCCD1A6NED2 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
RCCD1A6NED2 U6.58-201ENST00000613107 107 ntBASIC1.03□□□□□ -2.24
RCCD1A6NED2 RNU6-810P-201ENST00000364001 107 ntBASIC1.02□□□□□ -2.25
RCCD1A6NED2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
RCCD1A6NED2 RNU4-33P-201ENST00000364316 85 ntBASIC1.02□□□□□ -2.25
RCCD1A6NED2 MIR3925-201ENST00000584674 77 ntBASIC1.01□□□□□ -2.25
RCCD1A6NED2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
RCCD1A6NED2 MIR548X-201ENST00000580069 75 ntBASIC1□□□□□ -2.25
RCCD1A6NED2 MIR4452-201ENST00000583004 71 ntBASIC1□□□□□ -2.25
RCCD1A6NED2 MIR499B-201ENST00000636498 73 ntBASIC1□□□□□ -2.25
RCCD1A6NED2 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
RCCD1A6NED2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
RCCD1A6NED2 RNU7-129P-201ENST00000516128 62 ntBASIC0.99□□□□□ -2.25
RCCD1A6NED2 AL353803.5-201ENST00000599815 141 ntBASIC0.99□□□□□ -2.25
RCCD1A6NED2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
RCCD1A6NED2 MIR96-201ENST00000362288 78 ntBASIC0.98□□□□□ -2.25
RCCD1A6NED2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.98□□□□□ -2.25
RCCD1A6NED2 SNORD114-22-201ENST00000365423 72 ntBASIC0.97□□□□□ -2.25
RCCD1A6NED2 MIR106A-201ENST00000384870 81 ntBASIC0.97□□□□□ -2.25
RCCD1A6NED2 AP000676.1-201ENST00000533307 52 ntBASIC0.96□□□□□ -2.26
RCCD1A6NED2 RNU1-93P-201ENST00000364704 169 ntBASIC0.95□□□□□ -2.26
RCCD1A6NED2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.95□□□□□ -2.26
RCCD1A6NED2 SNORD115-23-201ENST00000364461 82 ntBASIC0.94□□□□□ -2.26
RCCD1A6NED2 SNORD44.1-201ENST00000363202 61 ntBASIC0.93□□□□□ -2.26
RCCD1A6NED2 snoR1.1-201ENST00000628177 80 ntBASIC0.93□□□□□ -2.26
RCCD1A6NED2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.92□□□□□ -2.26
RCCD1A6NED2 RNU6-35P-201ENST00000384530 107 ntBASIC0.91□□□□□ -2.26
RCCD1A6NED2 MIR4490-201ENST00000582647 84 ntBASIC0.91□□□□□ -2.26
RCCD1A6NED2 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
RCCD1A6NED2 RNU6-945P-201ENST00000383947 107 ntBASIC0.9□□□□□ -2.27
RCCD1A6NED2 MIR4698-201ENST00000577795 80 ntBASIC0.9□□□□□ -2.27
RCCD1A6NED2 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
RCCD1A6NED2 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
RCCD1A6NED2 RNA5SP98-201ENST00000363158 137 ntBASIC0.89□□□□□ -2.27
RCCD1A6NED2 RNU6-598P-201ENST00000364017 105 ntBASIC0.89□□□□□ -2.27
RCCD1A6NED2 MIR520E-201ENST00000384867 87 ntBASIC0.89□□□□□ -2.27
RCCD1A6NED2 MIR532-201ENST00000385025 91 ntBASIC0.89□□□□□ -2.27
RCCD1A6NED2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.89□□□□□ -2.27
RCCD1A6NED2 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
RCCD1A6NED2 RNU7-160P-201ENST00000516660 62 ntBASIC0.89□□□□□ -2.27
RCCD1A6NED2 AC108676.2-201ENST00000605225 163 ntBASIC0.89□□□□□ -2.27
RCCD1A6NED2 RNU6-930P-201ENST00000390938 100 ntBASIC0.88□□□□□ -2.27
RCCD1A6NED2 RPS29P1-201ENST00000465274 159 ntBASIC0.88□□□□□ -2.27
RCCD1A6NED2 RNA5SP220-201ENST00000516298 104 ntBASIC0.88□□□□□ -2.27
RCCD1A6NED2 MIR4432-201ENST00000581823 84 ntBASIC0.88□□□□□ -2.27
RCCD1A6NED2 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
RCCD1A6NED2 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.88□□□□□ -2.27
RCCD1A6NED2 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
RCCD1A6NED2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.86□□□□□ -2.27
RCCD1A6NED2 RNU6-419P-201ENST00000517030 63 ntBASIC0.86□□□□□ -2.27
RCCD1A6NED2 uc_338.17-201ENST00000619633 179 ntBASIC0.86□□□□□ -2.27
RCCD1A6NED2 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
RCCD1A6NED2 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
RCCD1A6NED2 MIR6734-201ENST00000621166 68 ntBASIC0.85□□□□□ -2.27
RCCD1A6NED2 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
RCCD1A6NED2 MIR579-201ENST00000385221 98 ntBASIC0.84□□□□□ -2.27
RCCD1A6NED2 snoU13.18-201ENST00000459483 104 ntBASIC0.84□□□□□ -2.27
RCCD1A6NED2 AC108740.1-201ENST00000498629 225 ntBASIC0.84□□□□□ -2.27
RCCD1A6NED2 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
RCCD1A6NED2 MIR6788-201ENST00000618842 66 ntBASIC0.84□□□□□ -2.27
RCCD1A6NED2 U2.18-201ENST00000622185 84 ntBASIC0.84□□□□□ -2.27
RCCD1A6NED2 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
RCCD1A6NED2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.83□□□□□ -2.28
RCCD1A6NED2 RNU7-151P-201ENST00000516930 53 ntBASIC0.83□□□□□ -2.28
RCCD1A6NED2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RCCD1A6NED2 SNORA62.4-201ENST00000365504 151 ntBASIC0.81□□□□□ -2.28
RCCD1A6NED2 MIR548AA1-201ENST00000384971 97 ntBASIC0.81□□□□□ -2.28
RCCD1A6NED2 RNU6-696P-201ENST00000390834 107 ntBASIC0.81□□□□□ -2.28
RCCD1A6NED2 RNU6-995P-201ENST00000391244 107 ntBASIC0.81□□□□□ -2.28
RCCD1A6NED2 MIR548J-201ENST00000408833 112 ntBASIC0.81□□□□□ -2.28
RCCD1A6NED2 RNU6-1262P-201ENST00000516217 96 ntBASIC0.81□□□□□ -2.28
RCCD1A6NED2 RNU6-127P-201ENST00000390897 107 ntBASIC0.8□□□□□ -2.28
RCCD1A6NED2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.8□□□□□ -2.28
RCCD1A6NED2 RNU6-1133P-201ENST00000410963 100 ntBASIC0.8□□□□□ -2.28
RCCD1A6NED2 SNORA68.3-201ENST00000515906 83 ntBASIC0.8□□□□□ -2.28
RCCD1A6NED2 RNU6-1206P-201ENST00000516339 103 ntBASIC0.8□□□□□ -2.28
RCCD1A6NED2 Y_RNA.698-201ENST00000516798 118 ntBASIC0.8□□□□□ -2.28
RCCD1A6NED2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.8□□□□□ -2.28
RCCD1A6NED2 MIR103A1-201ENST00000362165 78 ntBASIC0.79□□□□□ -2.28
RCCD1A6NED2 AL391099.1-201ENST00000624635 187 ntBASIC0.79□□□□□ -2.28
RCCD1A6NED2 Y_RNA.69-201ENST00000362885 109 ntBASIC0.78□□□□□ -2.28
RCCD1A6NED2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.78□□□□□ -2.28
RCCD1A6NED2 RNU7-55P-201ENST00000459426 62 ntBASIC0.78□□□□□ -2.28
RCCD1A6NED2 RNA5SP121-201ENST00000516537 101 ntBASIC0.78□□□□□ -2.28
RCCD1A6NED2 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
RCCD1A6NED2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.77□□□□□ -2.29
RCCD1A6NED2 MIRLET7D-201ENST00000362263 87 ntBASIC0.76□□□□□ -2.29
RCCD1A6NED2 RNU6-838P-201ENST00000363399 108 ntBASIC0.76□□□□□ -2.29
RCCD1A6NED2 RNU6-973P-201ENST00000364690 107 ntBASIC0.75□□□□□ -2.29
RCCD1A6NED2 MIR548F3-201ENST00000408509 87 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms