Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm25406-201ENSMUST00000157599 105 ntBASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm15467-201ENSMUST00000120582 445 ntBASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm11780-201ENSMUST00000136880 516 ntBASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.29■□□□□ 0.36
Nr1h3Q9Z0Y9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm11779-201ENSMUST00000118541 368 ntBASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h3Q9Z0Y9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm7222-201ENSMUST00000117512 906 ntBASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm25925-201ENSMUST00000158314 306 ntBASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms