Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
RpgrQ9R0X5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.24■□□□□ 0.19
RpgrQ9R0X5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Gm11336-201ENSMUST00000118168 334 ntBASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RpgrQ9R0X5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RpgrQ9R0X5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RpgrQ9R0X5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms