Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scn5aQ9JJV9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Gm18489-201ENSMUST00000172565 551 ntBASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Gm45612-201ENSMUST00000211320 160 ntBASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Gm8396-201ENSMUST00000057361 823 ntBASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn5aQ9JJV9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Mir1895-201ENSMUST00000122615 79 ntBASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn5aQ9JJV9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn5aQ9JJV9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms