Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Mir5130-201ENSMUST00000175160 84 ntBASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Gm10566-201ENSMUST00000086739 996 ntBASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbfox1Q9JJ43 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.61□□□□□ -0.23
Rbfox1Q9JJ43 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Prob1-201ENSMUST00000097619 3021 ntBASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Gm27389-201ENSMUST00000183622 195 ntBASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rbfox1Q9JJ43 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms