Protein–RNA interactions for Protein: Q9EPS9

Vmn1r56, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r56Q9EPS9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r56Q9EPS9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r56Q9EPS9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r56Q9EPS9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r56Q9EPS9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r56Q9EPS9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vmn1r56Q9EPS9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vmn1r56Q9EPS9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vmn1r56Q9EPS9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.33□□□□□ -0.11
Vmn1r56Q9EPS9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vmn1r56Q9EPS9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vmn1r56Q9EPS9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vmn1r56Q9EPS9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.33□□□□□ -0.11
Vmn1r56Q9EPS9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vmn1r56Q9EPS9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Gm14859-201ENSMUST00000117752 357 ntBASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vmn1r56Q9EPS9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Gm10566-201ENSMUST00000086739 996 ntBASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vmn1r56Q9EPS9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms