Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raf1Q99N57 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raf1Q99N57 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Raf1Q99N57 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raf1Q99N57 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Raf1Q99N57 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Raf1Q99N57 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Raf1Q99N57 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Raf1Q99N57 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.35□□□□□ -0.11
Raf1Q99N57 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.35□□□□□ -0.11
Raf1Q99N57 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.35□□□□□ -0.11
Raf1Q99N57 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Raf1Q99N57 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.35□□□□□ -0.11
Raf1Q99N57 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.35□□□□□ -0.11
Raf1Q99N57 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Raf1Q99N57 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Raf1Q99N57 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Raf1Q99N57 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.34□□□□□ -0.11
Raf1Q99N57 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Raf1Q99N57 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.34□□□□□ -0.11
Raf1Q99N57 Ank2-226ENSMUST00000189368 339 ntBASIC14.34□□□□□ -0.11
Raf1Q99N57 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Raf1Q99N57 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Raf1Q99N57 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Raf1Q99N57 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Raf1Q99N57 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Raf1Q99N57 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Raf1Q99N57 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.33□□□□□ -0.11
Raf1Q99N57 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Raf1Q99N57 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Raf1Q99N57 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.33□□□□□ -0.12
Raf1Q99N57 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.33□□□□□ -0.12
Raf1Q99N57 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Raf1Q99N57 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.33□□□□□ -0.12
Raf1Q99N57 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Raf1Q99N57 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.33□□□□□ -0.12
Raf1Q99N57 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Raf1Q99N57 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Raf1Q99N57 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms