Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx6-1Q99MA9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.93□□□□□ -0.02
Nkx6-1Q99MA9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-1Q99MA9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Mir1895-201ENSMUST00000122615 79 ntBASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Mir6404-201ENSMUST00000183699 94 ntBASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Gm27494-201ENSMUST00000184735 189 ntBASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-1Q99MA9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms