Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb4Q91XZ6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Gm36967-201ENSMUST00000193814 266 ntBASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.89■□□□□ 0.13
Pcdhb4Q91XZ6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb4Q91XZ6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb4Q91XZ6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms