Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Gm7791-201ENSMUST00000219066 539 ntBASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh18Q8VHR0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh18Q8VHR0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh18Q8VHR0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Pcdh18Q8VHR0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh18Q8VHR0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms