Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Trmt13-210ENSMUST00000198454 880 ntBASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc58Q8R3Q6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gm5643-201ENSMUST00000117081 966 ntBASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gm12085-201ENSMUST00000119263 940 ntBASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc58Q8R3Q6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Gm37856-201ENSMUST00000191634 999 ntBASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Actl10-202ENSMUST00000226583 1501 ntBASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc58Q8R3Q6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc58Q8R3Q6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc58Q8R3Q6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc58Q8R3Q6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc58Q8R3Q6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms