Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Gm9731-201ENSMUST00000209480 747 ntBASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf4Q8K4J2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf4Q8K4J2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf4Q8K4J2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Gm18958-201ENSMUST00000174258 762 ntBASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf4Q8K4J2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms