Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Gm13238-201ENSMUST00000117655 780 ntBASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hist3h2bbQ8CGP0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist3h2bbQ8CGP0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hist3h2bbQ8CGP0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hist3h2bbQ8CGP0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hist3h2bbQ8CGP0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Gm43566-201ENSMUST00000196851 808 ntBASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hist3h2bbQ8CGP0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hist3h2bbQ8CGP0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hist3h2bbQ8CGP0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Hist3h2bbQ8CGP0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hist3h2bbQ8CGP0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hist3h2bbQ8CGP0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms