Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.31■□□□□ 0.52
Smc2Q8CG48 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.31■□□□□ 0.52
Smc2Q8CG48 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc2Q8CG48 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.3■□□□□ 0.52
Smc2Q8CG48 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.3■□□□□ 0.52
Smc2Q8CG48 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc2Q8CG48 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.29■□□□□ 0.52
Smc2Q8CG48 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc2Q8CG48 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Smc2Q8CG48 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.28■□□□□ 0.52
Smc2Q8CG48 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc2Q8CG48 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.27■□□□□ 0.52
Smc2Q8CG48 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smc2Q8CG48 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.27■□□□□ 0.52
Smc2Q8CG48 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc2Q8CG48 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms