Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup88Q8CEC0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup88Q8CEC0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup88Q8CEC0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup88Q8CEC0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.83■□□□□ 0.61
Nup88Q8CEC0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup88Q8CEC0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup88Q8CEC0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup88Q8CEC0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup88Q8CEC0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Nup88Q8CEC0 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup88Q8CEC0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms