Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Gm11025-201ENSMUST00000140773 466 ntBASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.78■□□□□ 0.28
Npas4Q8BGD7 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npas4Q8BGD7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npas4Q8BGD7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Npas4Q8BGD7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Npas4Q8BGD7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Npas4Q8BGD7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.77■□□□□ 0.27
Npas4Q8BGD7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Npas4Q8BGD7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.77■□□□□ 0.27
Npas4Q8BGD7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Npas4Q8BGD7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Gm15920-201ENSMUST00000118998 402 ntBASIC16.76■□□□□ 0.27
Npas4Q8BGD7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Auts2-212ENSMUST00000178555 309 ntBASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npas4Q8BGD7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.75■□□□□ 0.27
Npas4Q8BGD7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npas4Q8BGD7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms