Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ckap2Q3V1H1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Gm10819-201ENSMUST00000099988 561 ntBASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ckap2Q3V1H1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ckap2Q3V1H1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm12644-201ENSMUST00000119935 606 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm8825-201ENSMUST00000182565 998 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm4518-201ENSMUST00000182638 718 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm7506-201ENSMUST00000207758 815 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ckap2Q3V1H1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Gm4459-201ENSMUST00000118750 468 ntBASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Gm34391-201ENSMUST00000203706 907 ntBASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ckap2Q3V1H1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms