Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim63Q38HM4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim63Q38HM4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.23□□□□□ -0.29
Trim63Q38HM4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim63Q38HM4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.22□□□□□ -0.29
Trim63Q38HM4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim63Q38HM4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms