Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim43cP86449 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim43cP86449 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43cP86449 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim43cP86449 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43cP86449 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trim43cP86449 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trim43cP86449 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim43cP86449 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.35■□□□□ 0.37
Trim43cP86449 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim43cP86449 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trim43cP86449 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim43cP86449 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.35■□□□□ 0.37
Trim43cP86449 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim43cP86449 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim43cP86449 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim43cP86449 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43cP86449 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim43cP86449 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim43cP86449 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim43cP86449 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.34■□□□□ 0.37
Trim43cP86449 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim43cP86449 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Trim43cP86449 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim43cP86449 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43cP86449 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trim43cP86449 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43cP86449 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43cP86449 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43cP86449 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43cP86449 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trim43cP86449 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43cP86449 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim43cP86449 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.33■□□□□ 0.36
Trim43cP86449 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Trim43cP86449 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim43cP86449 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.33■□□□□ 0.36
Trim43cP86449 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.33■□□□□ 0.36
Trim43cP86449 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.33■□□□□ 0.36
Trim43cP86449 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim43cP86449 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43cP86449 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim43cP86449 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim43cP86449 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms