Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.22□□□□□ -0.13
H3f3aP84244 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.22□□□□□ -0.13
H3f3aP84244 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.22□□□□□ -0.13
H3f3aP84244 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.22□□□□□ -0.13
H3f3aP84244 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
H3f3aP84244 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
H3f3aP84244 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
H3f3aP84244 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
H3f3aP84244 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
H3f3aP84244 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
H3f3aP84244 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
H3f3aP84244 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3aP84244 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3aP84244 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3aP84244 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.21□□□□□ -0.13
H3f3aP84244 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.21□□□□□ -0.13
H3f3aP84244 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3aP84244 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3aP84244 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3aP84244 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3aP84244 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3aP84244 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
H3f3aP84244 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
H3f3aP84244 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3aP84244 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
H3f3aP84244 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3aP84244 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3aP84244 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H3f3aP84244 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
H3f3aP84244 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
H3f3aP84244 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
H3f3aP84244 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.2□□□□□ -0.14
H3f3aP84244 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
H3f3aP84244 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.2□□□□□ -0.14
H3f3aP84244 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
H3f3aP84244 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.2□□□□□ -0.14
H3f3aP84244 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3aP84244 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.19□□□□□ -0.14
H3f3aP84244 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
H3f3aP84244 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.19□□□□□ -0.14
H3f3aP84244 Gm15165-201ENSMUST00000118140 502 ntBASIC14.19□□□□□ -0.14
H3f3aP84244 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.19□□□□□ -0.14
H3f3aP84244 Gm25406-201ENSMUST00000157599 105 ntBASIC14.19□□□□□ -0.14
H3f3aP84244 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.19□□□□□ -0.14
H3f3aP84244 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.19□□□□□ -0.14
H3f3aP84244 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.19□□□□□ -0.14
H3f3aP84244 Gm10819-201ENSMUST00000099988 561 ntBASIC14.19□□□□□ -0.14
H3f3aP84244 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3aP84244 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
H3f3aP84244 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3aP84244 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3aP84244 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3aP84244 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3aP84244 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.18□□□□□ -0.14
H3f3aP84244 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.18□□□□□ -0.14
H3f3aP84244 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3aP84244 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3aP84244 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3aP84244 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.18□□□□□ -0.14
H3f3aP84244 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H3f3aP84244 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.18□□□□□ -0.14
H3f3aP84244 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms