Protein–RNA interactions for Protein: P51906

Slc1a1, Excitatory amino acid transporter 3, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a1P51906 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a1P51906 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a1P51906 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Slc1a1P51906 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc1a1P51906 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a1P51906 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a1P51906 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a1P51906 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a1P51906 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Slc1a1P51906 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a1P51906 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a1P51906 App-207ENSMUST00000227737 2827 ntBASIC16.77■□□□□ 0.27
Slc1a1P51906 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a1P51906 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.77■□□□□ 0.27
Slc1a1P51906 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.77■□□□□ 0.27
Slc1a1P51906 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc1a1P51906 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.76■□□□□ 0.27
Slc1a1P51906 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc1a1P51906 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Slc1a1P51906 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Slc1a1P51906 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Slc1a1P51906 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Slc1a1P51906 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Slc1a1P51906 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc1a1P51906 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc1a1P51906 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Gm10013-201ENSMUST00000106074 672 ntBASIC16.75■□□□□ 0.27
Slc1a1P51906 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Slc1a1P51906 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc1a1P51906 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Slc1a1P51906 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Slc1a1P51906 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Slc1a1P51906 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc1a1P51906 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Slc1a1P51906 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Slc1a1P51906 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Slc1a1P51906 Gm9013-201ENSMUST00000132939 882 ntBASIC16.74■□□□□ 0.27
Slc1a1P51906 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.74■□□□□ 0.27
Slc1a1P51906 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Slc1a1P51906 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc1a1P51906 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc1a1P51906 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.73■□□□□ 0.27
Slc1a1P51906 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.73■□□□□ 0.27
Slc1a1P51906 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Mir770-201ENSMUST00000103252 94 ntBASIC16.73■□□□□ 0.27
Slc1a1P51906 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Slc1a1P51906 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.73■□□□□ 0.27
Slc1a1P51906 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Slc1a1P51906 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Slc1a1P51906 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Slc1a1P51906 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.73■□□□□ 0.27
Slc1a1P51906 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Slc1a1P51906 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc1a1P51906 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Slc1a1P51906 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc1a1P51906 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms