Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nedd4P46935 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nedd4P46935 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.15■□□□□ 0.66
Nedd4P46935 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.15■□□□□ 0.66
Nedd4P46935 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nedd4P46935 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.15■□□□□ 0.66
Nedd4P46935 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nedd4P46935 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.15■□□□□ 0.66
Nedd4P46935 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.15■□□□□ 0.66
Nedd4P46935 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Nedd4P46935 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd4P46935 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nedd4P46935 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nedd4P46935 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nedd4P46935 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nedd4P46935 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Nedd4P46935 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nedd4P46935 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd4P46935 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd4P46935 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nedd4P46935 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nedd4P46935 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.14■□□□□ 0.65
Nedd4P46935 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.14■□□□□ 0.65
Nedd4P46935 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd4P46935 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd4P46935 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd4P46935 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd4P46935 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.14■□□□□ 0.65
Nedd4P46935 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nedd4P46935 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd4P46935 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd4P46935 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.14■□□□□ 0.65
Nedd4P46935 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
Nedd4P46935 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nedd4P46935 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.13■□□□□ 0.65
Nedd4P46935 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.13■□□□□ 0.65
Nedd4P46935 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Nedd4P46935 Thap2-203ENSMUST00000218989 527 ntBASIC19.13■□□□□ 0.65
Nedd4P46935 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Nedd4P46935 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nedd4P46935 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.13■□□□□ 0.65
Nedd4P46935 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nedd4P46935 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd4P46935 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Nedd4P46935 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.12■□□□□ 0.65
Nedd4P46935 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Nedd4P46935 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.12■□□□□ 0.65
Nedd4P46935 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.12■□□□□ 0.65
Nedd4P46935 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.12■□□□□ 0.65
Nedd4P46935 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nedd4P46935 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nedd4P46935 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Gm13823-201ENSMUST00000119930 345 ntBASIC19.12■□□□□ 0.65
Nedd4P46935 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nedd4P46935 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nedd4P46935 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd4P46935 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nedd4P46935 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms