Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.28■□□□□ 0.04
Cdh4P39038 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cdh4P39038 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.28■□□□□ 0.04
Cdh4P39038 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.28■□□□□ 0.04
Cdh4P39038 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cdh4P39038 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdh4P39038 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.28■□□□□ 0.04
Cdh4P39038 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdh4P39038 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Cdh4P39038 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cdh4P39038 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.27■□□□□ 0.04
Cdh4P39038 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdh4P39038 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.27■□□□□ 0.04
Cdh4P39038 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh4P39038 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.27■□□□□ 0.03
Cdh4P39038 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cdh4P39038 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh4P39038 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh4P39038 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh4P39038 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh4P39038 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh4P39038 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Cdh4P39038 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cdh4P39038 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Cdh4P39038 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdh4P39038 Gm15165-201ENSMUST00000118140 502 ntBASIC15.26■□□□□ 0.03
Cdh4P39038 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdh4P39038 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.26■□□□□ 0.03
Cdh4P39038 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.26■□□□□ 0.03
Cdh4P39038 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdh4P39038 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.26■□□□□ 0.03
Cdh4P39038 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdh4P39038 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdh4P39038 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdh4P39038 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdh4P39038 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh4P39038 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cdh4P39038 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdh4P39038 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh4P39038 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms