Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P04946 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.66□□□□□ -0.22
P04946 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
P04946 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.66□□□□□ -0.22
P04946 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.66□□□□□ -0.22
P04946 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P04946 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P04946 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
P04946 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
P04946 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P04946 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04946 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.65□□□□□ -0.22
P04946 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.65□□□□□ -0.22
P04946 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
P04946 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
P04946 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.65□□□□□ -0.22
P04946 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.65□□□□□ -0.22
P04946 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
P04946 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
P04946 Gm15590-201ENSMUST00000078419 552 ntBASIC13.65□□□□□ -0.22
P04946 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.65□□□□□ -0.22
P04946 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04946 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.64□□□□□ -0.23
P04946 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
P04946 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.64□□□□□ -0.23
P04946 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Gm13036-201ENSMUST00000117799 748 ntBASIC13.64□□□□□ -0.23
P04946 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.64□□□□□ -0.23
P04946 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.64□□□□□ -0.23
P04946 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Gm19164-201ENSMUST00000210667 640 ntBASIC13.64□□□□□ -0.23
P04946 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.64□□□□□ -0.23
P04946 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.64□□□□□ -0.23
P04946 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04946 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
P04946 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
P04946 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
P04946 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.63□□□□□ -0.23
P04946 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
P04946 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
P04946 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04946 Gm15358-201ENSMUST00000119249 520 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms