Protein–RNA interactions for Protein: P02830

Hoxa7, Homeobox protein Hox-A7, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa7P02830 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.3■□□□□ 0.68
Hoxa7P02830 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.3■□□□□ 0.68
Hoxa7P02830 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Hoxa7P02830 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hoxa7P02830 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hoxa7P02830 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hoxa7P02830 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hoxa7P02830 Asic1-205ENSMUST00000228185 1818 ntBASIC19.3■□□□□ 0.68
Hoxa7P02830 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa7P02830 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hoxa7P02830 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa7P02830 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Hoxa7P02830 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa7P02830 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.29■□□□□ 0.68
Hoxa7P02830 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hoxa7P02830 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa7P02830 Gm15165-201ENSMUST00000118140 502 ntBASIC19.29■□□□□ 0.68
Hoxa7P02830 Gm12497-201ENSMUST00000138778 237 ntBASIC19.29■□□□□ 0.68
Hoxa7P02830 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Hoxa7P02830 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.29■□□□□ 0.68
Hoxa7P02830 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.29■□□□□ 0.68
Hoxa7P02830 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa7P02830 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa7P02830 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa7P02830 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa7P02830 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.28■□□□□ 0.68
Hoxa7P02830 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hoxa7P02830 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.28■□□□□ 0.68
Hoxa7P02830 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.28■□□□□ 0.68
Hoxa7P02830 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Hoxa7P02830 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa7P02830 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.27■□□□□ 0.68
Hoxa7P02830 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.27■□□□□ 0.68
Hoxa7P02830 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.27■□□□□ 0.68
Hoxa7P02830 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.27■□□□□ 0.68
Hoxa7P02830 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.27■□□□□ 0.68
Hoxa7P02830 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.27■□□□□ 0.68
Hoxa7P02830 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.27■□□□□ 0.68
Hoxa7P02830 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.27■□□□□ 0.68
Hoxa7P02830 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa7P02830 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxa7P02830 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxa7P02830 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxa7P02830 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.26■□□□□ 0.67
Hoxa7P02830 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.26■□□□□ 0.67
Hoxa7P02830 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hoxa7P02830 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa7P02830 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms