Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
IghmP01872 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.97□□□□□ -0.01
IghmP01872 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
IghmP01872 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.97□□□□□ -0.01
IghmP01872 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.97□□□□□ -0.01
IghmP01872 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.97□□□□□ -0.01
IghmP01872 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
IghmP01872 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.97□□□□□ -0.01
IghmP01872 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IghmP01872 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
IghmP01872 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.96□□□□□ -0.01
IghmP01872 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
IghmP01872 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.96□□□□□ -0.01
IghmP01872 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
IghmP01872 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.96□□□□□ -0.01
IghmP01872 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.96□□□□□ -0.01
IghmP01872 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.96□□□□□ -0.01
IghmP01872 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Gm9987-201ENSMUST00000069768 567 ntBASIC14.96□□□□□ -0.01
IghmP01872 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IghmP01872 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.96□□□□□ -0.02
IghmP01872 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IghmP01872 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IghmP01872 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IghmP01872 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IghmP01872 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
IghmP01872 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Gm10231-201ENSMUST00000181584 441 ntBASIC14.95□□□□□ -0.02
IghmP01872 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Gm10175-202ENSMUST00000208752 441 ntBASIC14.95□□□□□ -0.02
IghmP01872 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.95□□□□□ -0.02
IghmP01872 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IghmP01872 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.94□□□□□ -0.02
IghmP01872 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.94□□□□□ -0.02
IghmP01872 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.94□□□□□ -0.02
IghmP01872 Gm6623-201ENSMUST00000173570 544 ntBASIC14.94□□□□□ -0.02
IghmP01872 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 Gm5587-201ENSMUST00000206270 674 ntBASIC14.94□□□□□ -0.02
IghmP01872 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IghmP01872 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms