Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Hcn1O88704 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hcn1O88704 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Hcn1O88704 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn1O88704 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn1O88704 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn1O88704 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Hcn1O88704 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.33■□□□□ 0.05
Hcn1O88704 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.33■□□□□ 0.05
Hcn1O88704 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn1O88704 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hcn1O88704 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Gm11950-201ENSMUST00000121615 838 ntBASIC15.33■□□□□ 0.04
Hcn1O88704 Gm6623-201ENSMUST00000173570 544 ntBASIC15.33■□□□□ 0.04
Hcn1O88704 Gm44450-201ENSMUST00000199528 114 ntBASIC15.33■□□□□ 0.04
Hcn1O88704 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.33■□□□□ 0.04
Hcn1O88704 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.33■□□□□ 0.04
Hcn1O88704 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.33■□□□□ 0.04
Hcn1O88704 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.33■□□□□ 0.04
Hcn1O88704 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Hcn1O88704 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Hcn1O88704 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hcn1O88704 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.32■□□□□ 0.04
Hcn1O88704 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Hcn1O88704 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.32■□□□□ 0.04
Hcn1O88704 Gm7367-201ENSMUST00000057611 492 ntBASIC15.32■□□□□ 0.04
Hcn1O88704 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.32■□□□□ 0.04
Hcn1O88704 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Hcn1O88704 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.32■□□□□ 0.04
Hcn1O88704 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hcn1O88704 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hcn1O88704 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hcn1O88704 Prob1-201ENSMUST00000097619 3021 ntBASIC15.31■□□□□ 0.04
Hcn1O88704 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hcn1O88704 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hcn1O88704 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Hcn1O88704 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.31■□□□□ 0.04
Hcn1O88704 Gm21362-201ENSMUST00000194272 928 ntBASIC15.31■□□□□ 0.04
Hcn1O88704 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.31■□□□□ 0.04
Hcn1O88704 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.31■□□□□ 0.04
Hcn1O88704 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.31■□□□□ 0.04
Hcn1O88704 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hcn1O88704 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hcn1O88704 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn1O88704 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms