Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a20bO88575 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.36■□□□□ 0.37
Slc6a20bO88575 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Gm20553-201ENSMUST00000204205 844 ntBASIC17.36■□□□□ 0.37
Slc6a20bO88575 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.36■□□□□ 0.37
Slc6a20bO88575 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.36■□□□□ 0.37
Slc6a20bO88575 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Slc6a20bO88575 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.35■□□□□ 0.37
Slc6a20bO88575 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a20bO88575 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.34■□□□□ 0.37
Slc6a20bO88575 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a20bO88575 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a20bO88575 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a20bO88575 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a20bO88575 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a20bO88575 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a20bO88575 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a20bO88575 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a20bO88575 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Gm18889-201ENSMUST00000174284 929 ntBASIC17.33■□□□□ 0.36
Slc6a20bO88575 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc6a20bO88575 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.33■□□□□ 0.36
Slc6a20bO88575 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a20bO88575 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms