Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pfdn2O70591 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.35□□□□□ -0.27
Pfdn2O70591 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.34□□□□□ -0.27
Pfdn2O70591 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.34□□□□□ -0.27
Pfdn2O70591 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.34□□□□□ -0.27
Pfdn2O70591 Gm42545-201ENSMUST00000202755 922 ntBASIC13.34□□□□□ -0.27
Pfdn2O70591 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Pfdn2O70591 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn2O70591 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.33□□□□□ -0.27
Pfdn2O70591 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn2O70591 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn2O70591 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn2O70591 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pfdn2O70591 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pfdn2O70591 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.33□□□□□ -0.28
Pfdn2O70591 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pfdn2O70591 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pfdn2O70591 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.33□□□□□ -0.28
Pfdn2O70591 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn2O70591 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pfdn2O70591 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.32□□□□□ -0.28
Pfdn2O70591 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pfdn2O70591 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Pfdn2O70591 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.32□□□□□ -0.28
Pfdn2O70591 Asic1-205ENSMUST00000228185 1818 ntBASIC13.32□□□□□ -0.28
Pfdn2O70591 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Pfdn2O70591 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.32□□□□□ -0.28
Pfdn2O70591 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.32□□□□□ -0.28
Pfdn2O70591 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pfdn2O70591 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pfdn2O70591 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.32□□□□□ -0.28
Pfdn2O70591 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.32□□□□□ -0.28
Pfdn2O70591 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn2O70591 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms