Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.09□□□□□ -0.63
Sigmar1O55242 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sigmar1O55242 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.09□□□□□ -0.63
Sigmar1O55242 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Sigmar1O55242 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sigmar1O55242 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sigmar1O55242 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sigmar1O55242 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Sigmar1O55242 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Sigmar1O55242 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sigmar1O55242 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.08□□□□□ -0.64
Sigmar1O55242 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Sigmar1O55242 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.08□□□□□ -0.64
Sigmar1O55242 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Sigmar1O55242 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sigmar1O55242 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sigmar1O55242 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sigmar1O55242 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sigmar1O55242 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.07□□□□□ -0.64
Sigmar1O55242 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.07□□□□□ -0.64
Sigmar1O55242 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Sigmar1O55242 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Sigmar1O55242 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.07□□□□□ -0.64
Sigmar1O55242 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sigmar1O55242 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sigmar1O55242 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.07□□□□□ -0.64
Sigmar1O55242 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.06□□□□□ -0.64
Sigmar1O55242 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.06□□□□□ -0.64
Sigmar1O55242 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Gm22325-201ENSMUST00000158904 308 ntBASIC11.06□□□□□ -0.64
Sigmar1O55242 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.06□□□□□ -0.64
Sigmar1O55242 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.06□□□□□ -0.64
Sigmar1O55242 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sigmar1O55242 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms